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BuT2 Is a Member of the Third Major Group of hAT Transposons and Is Involved in Horizontal Transfer Events in the Genus Drosophila

The hAT superfamily comprises a large and diverse array of DNA transposons found in all supergroups of eukaryotes. Here we characterized the Drosophila buzzatii BuT2 element and found that it harbors a five-exon gene encoding a 643-aa putatively functional transposase. A phylogeny built with 85 hAT...

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Autores principales: Rossato, Dirleane Ottonelli, Ludwig, Adriana, Deprá, Maríndia, Loreto, Elgion L. S., Ruiz, Alfredo, Valente, Vera L. S.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Oxford University Press 2014
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3942097/
https://www.ncbi.nlm.nih.gov/pubmed/24459285
http://dx.doi.org/10.1093/gbe/evu017
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author Rossato, Dirleane Ottonelli
Ludwig, Adriana
Deprá, Maríndia
Loreto, Elgion L. S.
Ruiz, Alfredo
Valente, Vera L. S.
author_facet Rossato, Dirleane Ottonelli
Ludwig, Adriana
Deprá, Maríndia
Loreto, Elgion L. S.
Ruiz, Alfredo
Valente, Vera L. S.
author_sort Rossato, Dirleane Ottonelli
collection PubMed
description The hAT superfamily comprises a large and diverse array of DNA transposons found in all supergroups of eukaryotes. Here we characterized the Drosophila buzzatii BuT2 element and found that it harbors a five-exon gene encoding a 643-aa putatively functional transposase. A phylogeny built with 85 hAT transposases yielded, in addition to the two major groups already described, Ac and Buster, a third one comprising 20 sequences that includes BuT2, Tip100, hAT-4_BM, and RP-hAT1. This third group is here named Tip. In addition, we studied the phylogenetic distribution and evolution of BuT2 by in silico searches and molecular approaches. Our data revealed BuT2 was, most often, vertically transmitted during the evolution of genus Drosophila being lost independently in several species. Nevertheless, we propose the occurrence of three horizontal transfer events to explain its distribution and conservation among species. Another aspect of BuT2 evolution and life cycle is the presence of short related sequences, which contain similar 5′ and 3′ regions, including the terminal inverted repeats. These sequences that can be considered as miniature inverted repeat transposable elements probably originated by internal deletion of complete copies and show evidences of recent mobilization.
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spelling pubmed-39420972014-03-04 BuT2 Is a Member of the Third Major Group of hAT Transposons and Is Involved in Horizontal Transfer Events in the Genus Drosophila Rossato, Dirleane Ottonelli Ludwig, Adriana Deprá, Maríndia Loreto, Elgion L. S. Ruiz, Alfredo Valente, Vera L. S. Genome Biol Evol The hAT superfamily comprises a large and diverse array of DNA transposons found in all supergroups of eukaryotes. Here we characterized the Drosophila buzzatii BuT2 element and found that it harbors a five-exon gene encoding a 643-aa putatively functional transposase. A phylogeny built with 85 hAT transposases yielded, in addition to the two major groups already described, Ac and Buster, a third one comprising 20 sequences that includes BuT2, Tip100, hAT-4_BM, and RP-hAT1. This third group is here named Tip. In addition, we studied the phylogenetic distribution and evolution of BuT2 by in silico searches and molecular approaches. Our data revealed BuT2 was, most often, vertically transmitted during the evolution of genus Drosophila being lost independently in several species. Nevertheless, we propose the occurrence of three horizontal transfer events to explain its distribution and conservation among species. Another aspect of BuT2 evolution and life cycle is the presence of short related sequences, which contain similar 5′ and 3′ regions, including the terminal inverted repeats. These sequences that can be considered as miniature inverted repeat transposable elements probably originated by internal deletion of complete copies and show evidences of recent mobilization. Oxford University Press 2014-01-22 /pmc/articles/PMC3942097/ /pubmed/24459285 http://dx.doi.org/10.1093/gbe/evu017 Text en © The Author(s) 2014. Published by Oxford University Press on behalf of the Society for Molecular Biology and Evolution. http://creativecommons.org/licenses/by/3.0/ This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/3.0/), which permits unrestricted reuse, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Rossato, Dirleane Ottonelli
Ludwig, Adriana
Deprá, Maríndia
Loreto, Elgion L. S.
Ruiz, Alfredo
Valente, Vera L. S.
BuT2 Is a Member of the Third Major Group of hAT Transposons and Is Involved in Horizontal Transfer Events in the Genus Drosophila
title BuT2 Is a Member of the Third Major Group of hAT Transposons and Is Involved in Horizontal Transfer Events in the Genus Drosophila
title_full BuT2 Is a Member of the Third Major Group of hAT Transposons and Is Involved in Horizontal Transfer Events in the Genus Drosophila
title_fullStr BuT2 Is a Member of the Third Major Group of hAT Transposons and Is Involved in Horizontal Transfer Events in the Genus Drosophila
title_full_unstemmed BuT2 Is a Member of the Third Major Group of hAT Transposons and Is Involved in Horizontal Transfer Events in the Genus Drosophila
title_short BuT2 Is a Member of the Third Major Group of hAT Transposons and Is Involved in Horizontal Transfer Events in the Genus Drosophila
title_sort but2 is a member of the third major group of hat transposons and is involved in horizontal transfer events in the genus drosophila
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3942097/
https://www.ncbi.nlm.nih.gov/pubmed/24459285
http://dx.doi.org/10.1093/gbe/evu017
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