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Sparse Representation for Tumor Classification Based on Feature Extraction Using Latent Low-Rank Representation

Accurate tumor classification is crucial to the proper treatment of cancer. To now, sparse representation (SR) has shown its great performance for tumor classification. This paper conceives a new SR-based method for tumor classification by using gene expression data. In the proposed method, we first...

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Detalles Bibliográficos
Autores principales: Gan, Bin, Zheng, Chun-Hou, Zhang, Jun, Wang, Hong-Qiang
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Hindawi Publishing Corporation 2014
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3942202/
https://www.ncbi.nlm.nih.gov/pubmed/24678505
http://dx.doi.org/10.1155/2014/420856
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author Gan, Bin
Zheng, Chun-Hou
Zhang, Jun
Wang, Hong-Qiang
author_facet Gan, Bin
Zheng, Chun-Hou
Zhang, Jun
Wang, Hong-Qiang
author_sort Gan, Bin
collection PubMed
description Accurate tumor classification is crucial to the proper treatment of cancer. To now, sparse representation (SR) has shown its great performance for tumor classification. This paper conceives a new SR-based method for tumor classification by using gene expression data. In the proposed method, we firstly use latent low-rank representation for extracting salient features and removing noise from the original samples data. Then we use sparse representation classifier (SRC) to build tumor classification model. The experimental results on several real-world data sets show that our method is more efficient and more effective than the previous classification methods including SVM, SRC, and LASSO.
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spelling pubmed-39422022014-03-27 Sparse Representation for Tumor Classification Based on Feature Extraction Using Latent Low-Rank Representation Gan, Bin Zheng, Chun-Hou Zhang, Jun Wang, Hong-Qiang Biomed Res Int Research Article Accurate tumor classification is crucial to the proper treatment of cancer. To now, sparse representation (SR) has shown its great performance for tumor classification. This paper conceives a new SR-based method for tumor classification by using gene expression data. In the proposed method, we firstly use latent low-rank representation for extracting salient features and removing noise from the original samples data. Then we use sparse representation classifier (SRC) to build tumor classification model. The experimental results on several real-world data sets show that our method is more efficient and more effective than the previous classification methods including SVM, SRC, and LASSO. Hindawi Publishing Corporation 2014 2014-02-11 /pmc/articles/PMC3942202/ /pubmed/24678505 http://dx.doi.org/10.1155/2014/420856 Text en Copyright © 2014 Bin Gan et al. https://creativecommons.org/licenses/by/3.0/ This is an open access article distributed under the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Research Article
Gan, Bin
Zheng, Chun-Hou
Zhang, Jun
Wang, Hong-Qiang
Sparse Representation for Tumor Classification Based on Feature Extraction Using Latent Low-Rank Representation
title Sparse Representation for Tumor Classification Based on Feature Extraction Using Latent Low-Rank Representation
title_full Sparse Representation for Tumor Classification Based on Feature Extraction Using Latent Low-Rank Representation
title_fullStr Sparse Representation for Tumor Classification Based on Feature Extraction Using Latent Low-Rank Representation
title_full_unstemmed Sparse Representation for Tumor Classification Based on Feature Extraction Using Latent Low-Rank Representation
title_short Sparse Representation for Tumor Classification Based on Feature Extraction Using Latent Low-Rank Representation
title_sort sparse representation for tumor classification based on feature extraction using latent low-rank representation
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3942202/
https://www.ncbi.nlm.nih.gov/pubmed/24678505
http://dx.doi.org/10.1155/2014/420856
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AT zhangjun sparserepresentationfortumorclassificationbasedonfeatureextractionusinglatentlowrankrepresentation
AT wanghongqiang sparserepresentationfortumorclassificationbasedonfeatureextractionusinglatentlowrankrepresentation