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Slovenian population data for five new European Standard Set Short tandem repeat loci and SE33 locus

AIM: To establish the allele distribution and statistical parameters of forensic interest for the D10S1248, D22S1045, D2S441, D1S1656, D12S391, and SE33 loci in Slovenian population and to compare allele frequencies with those from other populations. METHODS: We analyzed blood and buccal swab sample...

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Autores principales: Zupanič Pajnič, Irena, Podovšovnik Axelsson, Eva, Balažic, Jože
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Croatian Medical Schools 2014
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3944414/
https://www.ncbi.nlm.nih.gov/pubmed/24577822
http://dx.doi.org/10.3325/cmj.2014.55.14
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author Zupanič Pajnič, Irena
Podovšovnik Axelsson, Eva
Balažic, Jože
author_facet Zupanič Pajnič, Irena
Podovšovnik Axelsson, Eva
Balažic, Jože
author_sort Zupanič Pajnič, Irena
collection PubMed
description AIM: To establish the allele distribution and statistical parameters of forensic interest for the D10S1248, D22S1045, D2S441, D1S1656, D12S391, and SE33 loci in Slovenian population and to compare allele frequencies with those from other populations. METHODS: We analyzed blood and buccal swab samples from 333 unrelated, healthy Slovenian individuals. All samples were genotyped using the AmpFlSTR NGM Kit to obtain the allele frequency data for the loci D10S1248, D22S1045, D2S441, D1S1656, and D12S391. Samples from 113 individuals were also analyzed using the PowerPlex ESX 17 system to obtain the allele frequency data for the SE33 locus. Allele frequencies and statistical parameters of forensic interest were determined and frequency profiles compared between Slovenian and other European Caucasian populations using the Arlequin software, version 3.5.1.3. RESULTS: The investigated short tandem repeat (STR) loci in Slovenian population had a great discriminating potential with a combined discrimination power of 0.99999998. The highest discrimination power and polymorphism information content were observed for the SE33 locus, followed by loci D1S1656, D12S391, D10S1248, D2S441, and D22S1045. When Slovenian allele frequency distribution was compared with other European populations, deviations were found only for Spanish and Italian population for D2S441 and D12S391. CONCLUSION: Slovenian population does not differ significantly from other European populations in terms of allele frequency distributions for the six analyzed STR loci. Based on forensic efficiency values, SE33 may be considered the most informative locus, which makes it especially useful in forensic investigations.
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spelling pubmed-39444142014-03-10 Slovenian population data for five new European Standard Set Short tandem repeat loci and SE33 locus Zupanič Pajnič, Irena Podovšovnik Axelsson, Eva Balažic, Jože Croat Med J Forensic Science AIM: To establish the allele distribution and statistical parameters of forensic interest for the D10S1248, D22S1045, D2S441, D1S1656, D12S391, and SE33 loci in Slovenian population and to compare allele frequencies with those from other populations. METHODS: We analyzed blood and buccal swab samples from 333 unrelated, healthy Slovenian individuals. All samples were genotyped using the AmpFlSTR NGM Kit to obtain the allele frequency data for the loci D10S1248, D22S1045, D2S441, D1S1656, and D12S391. Samples from 113 individuals were also analyzed using the PowerPlex ESX 17 system to obtain the allele frequency data for the SE33 locus. Allele frequencies and statistical parameters of forensic interest were determined and frequency profiles compared between Slovenian and other European Caucasian populations using the Arlequin software, version 3.5.1.3. RESULTS: The investigated short tandem repeat (STR) loci in Slovenian population had a great discriminating potential with a combined discrimination power of 0.99999998. The highest discrimination power and polymorphism information content were observed for the SE33 locus, followed by loci D1S1656, D12S391, D10S1248, D2S441, and D22S1045. When Slovenian allele frequency distribution was compared with other European populations, deviations were found only for Spanish and Italian population for D2S441 and D12S391. CONCLUSION: Slovenian population does not differ significantly from other European populations in terms of allele frequency distributions for the six analyzed STR loci. Based on forensic efficiency values, SE33 may be considered the most informative locus, which makes it especially useful in forensic investigations. Croatian Medical Schools 2014-02 /pmc/articles/PMC3944414/ /pubmed/24577822 http://dx.doi.org/10.3325/cmj.2014.55.14 Text en Copyright © 2014 by the Croatian Medical Journal. All rights reserved. http://creativecommons.org/licenses/by/2.5/ This is an open access article distributed under the Creative Commons Attribution License, which permits unrestricted non-commercial use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Forensic Science
Zupanič Pajnič, Irena
Podovšovnik Axelsson, Eva
Balažic, Jože
Slovenian population data for five new European Standard Set Short tandem repeat loci and SE33 locus
title Slovenian population data for five new European Standard Set Short tandem repeat loci and SE33 locus
title_full Slovenian population data for five new European Standard Set Short tandem repeat loci and SE33 locus
title_fullStr Slovenian population data for five new European Standard Set Short tandem repeat loci and SE33 locus
title_full_unstemmed Slovenian population data for five new European Standard Set Short tandem repeat loci and SE33 locus
title_short Slovenian population data for five new European Standard Set Short tandem repeat loci and SE33 locus
title_sort slovenian population data for five new european standard set short tandem repeat loci and se33 locus
topic Forensic Science
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3944414/
https://www.ncbi.nlm.nih.gov/pubmed/24577822
http://dx.doi.org/10.3325/cmj.2014.55.14
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