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Expert curation in UniProtKB: a case study on dealing with conflicting and erroneous data

UniProtKB/Swiss-Prot provides expert curation with information extracted from literature and curator-evaluated computational analysis. As knowledgebases continue to play an increasingly important role in scientific research, a number of studies have evaluated their accuracy and revealed various erro...

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Autores principales: Poux, Sylvain, Magrane, Michele, Arighi, Cecilia N., Bridge, Alan, O’Donovan, Claire, Laiho, Kati
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Oxford University Press 2014
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3950660/
https://www.ncbi.nlm.nih.gov/pubmed/24622611
http://dx.doi.org/10.1093/database/bau016
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author Poux, Sylvain
Magrane, Michele
Arighi, Cecilia N.
Bridge, Alan
O’Donovan, Claire
Laiho, Kati
author_facet Poux, Sylvain
Magrane, Michele
Arighi, Cecilia N.
Bridge, Alan
O’Donovan, Claire
Laiho, Kati
author_sort Poux, Sylvain
collection PubMed
description UniProtKB/Swiss-Prot provides expert curation with information extracted from literature and curator-evaluated computational analysis. As knowledgebases continue to play an increasingly important role in scientific research, a number of studies have evaluated their accuracy and revealed various errors. While some are curation errors, others are the result of incorrect information published in the scientific literature. By taking the example of sirtuin-5, a complex annotation case, we will describe the curation procedure of UniProtKB/Swiss-Prot and detail how we report conflicting information in the database. We will demonstrate the importance of collaboration between resources to ensure curation consistency and the value of contributions from the user community in helping maintain error-free resources. Database URL: www.uniprot.org
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spelling pubmed-39506602014-03-13 Expert curation in UniProtKB: a case study on dealing with conflicting and erroneous data Poux, Sylvain Magrane, Michele Arighi, Cecilia N. Bridge, Alan O’Donovan, Claire Laiho, Kati Database (Oxford) Original Article UniProtKB/Swiss-Prot provides expert curation with information extracted from literature and curator-evaluated computational analysis. As knowledgebases continue to play an increasingly important role in scientific research, a number of studies have evaluated their accuracy and revealed various errors. While some are curation errors, others are the result of incorrect information published in the scientific literature. By taking the example of sirtuin-5, a complex annotation case, we will describe the curation procedure of UniProtKB/Swiss-Prot and detail how we report conflicting information in the database. We will demonstrate the importance of collaboration between resources to ensure curation consistency and the value of contributions from the user community in helping maintain error-free resources. Database URL: www.uniprot.org Oxford University Press 2014-03-12 /pmc/articles/PMC3950660/ /pubmed/24622611 http://dx.doi.org/10.1093/database/bau016 Text en © The Author(s) 2014. Published by Oxford University Press. http://creativecommons.org/licenses/by/3.0/ This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/3.0/), which permits unrestricted reuse, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Original Article
Poux, Sylvain
Magrane, Michele
Arighi, Cecilia N.
Bridge, Alan
O’Donovan, Claire
Laiho, Kati
Expert curation in UniProtKB: a case study on dealing with conflicting and erroneous data
title Expert curation in UniProtKB: a case study on dealing with conflicting and erroneous data
title_full Expert curation in UniProtKB: a case study on dealing with conflicting and erroneous data
title_fullStr Expert curation in UniProtKB: a case study on dealing with conflicting and erroneous data
title_full_unstemmed Expert curation in UniProtKB: a case study on dealing with conflicting and erroneous data
title_short Expert curation in UniProtKB: a case study on dealing with conflicting and erroneous data
title_sort expert curation in uniprotkb: a case study on dealing with conflicting and erroneous data
topic Original Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3950660/
https://www.ncbi.nlm.nih.gov/pubmed/24622611
http://dx.doi.org/10.1093/database/bau016
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