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Expert curation in UniProtKB: a case study on dealing with conflicting and erroneous data
UniProtKB/Swiss-Prot provides expert curation with information extracted from literature and curator-evaluated computational analysis. As knowledgebases continue to play an increasingly important role in scientific research, a number of studies have evaluated their accuracy and revealed various erro...
Autores principales: | , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Oxford University Press
2014
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3950660/ https://www.ncbi.nlm.nih.gov/pubmed/24622611 http://dx.doi.org/10.1093/database/bau016 |
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author | Poux, Sylvain Magrane, Michele Arighi, Cecilia N. Bridge, Alan O’Donovan, Claire Laiho, Kati |
author_facet | Poux, Sylvain Magrane, Michele Arighi, Cecilia N. Bridge, Alan O’Donovan, Claire Laiho, Kati |
author_sort | Poux, Sylvain |
collection | PubMed |
description | UniProtKB/Swiss-Prot provides expert curation with information extracted from literature and curator-evaluated computational analysis. As knowledgebases continue to play an increasingly important role in scientific research, a number of studies have evaluated their accuracy and revealed various errors. While some are curation errors, others are the result of incorrect information published in the scientific literature. By taking the example of sirtuin-5, a complex annotation case, we will describe the curation procedure of UniProtKB/Swiss-Prot and detail how we report conflicting information in the database. We will demonstrate the importance of collaboration between resources to ensure curation consistency and the value of contributions from the user community in helping maintain error-free resources. Database URL: www.uniprot.org |
format | Online Article Text |
id | pubmed-3950660 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2014 |
publisher | Oxford University Press |
record_format | MEDLINE/PubMed |
spelling | pubmed-39506602014-03-13 Expert curation in UniProtKB: a case study on dealing with conflicting and erroneous data Poux, Sylvain Magrane, Michele Arighi, Cecilia N. Bridge, Alan O’Donovan, Claire Laiho, Kati Database (Oxford) Original Article UniProtKB/Swiss-Prot provides expert curation with information extracted from literature and curator-evaluated computational analysis. As knowledgebases continue to play an increasingly important role in scientific research, a number of studies have evaluated their accuracy and revealed various errors. While some are curation errors, others are the result of incorrect information published in the scientific literature. By taking the example of sirtuin-5, a complex annotation case, we will describe the curation procedure of UniProtKB/Swiss-Prot and detail how we report conflicting information in the database. We will demonstrate the importance of collaboration between resources to ensure curation consistency and the value of contributions from the user community in helping maintain error-free resources. Database URL: www.uniprot.org Oxford University Press 2014-03-12 /pmc/articles/PMC3950660/ /pubmed/24622611 http://dx.doi.org/10.1093/database/bau016 Text en © The Author(s) 2014. Published by Oxford University Press. http://creativecommons.org/licenses/by/3.0/ This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/3.0/), which permits unrestricted reuse, distribution, and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Original Article Poux, Sylvain Magrane, Michele Arighi, Cecilia N. Bridge, Alan O’Donovan, Claire Laiho, Kati Expert curation in UniProtKB: a case study on dealing with conflicting and erroneous data |
title | Expert curation in UniProtKB: a case study on dealing with conflicting and erroneous data |
title_full | Expert curation in UniProtKB: a case study on dealing with conflicting and erroneous data |
title_fullStr | Expert curation in UniProtKB: a case study on dealing with conflicting and erroneous data |
title_full_unstemmed | Expert curation in UniProtKB: a case study on dealing with conflicting and erroneous data |
title_short | Expert curation in UniProtKB: a case study on dealing with conflicting and erroneous data |
title_sort | expert curation in uniprotkb: a case study on dealing with conflicting and erroneous data |
topic | Original Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3950660/ https://www.ncbi.nlm.nih.gov/pubmed/24622611 http://dx.doi.org/10.1093/database/bau016 |
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