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Extraction of total RNA in the developing chicken forebrain

BACKGROUND: Gene expression of Gama-Aminobutyric acid (GABA(A)) receptor subunits may change during development. Procedures in molecular biology are required to understand the gene expression profile GABA(A) R in chicken. The outcome of the results depends on good-quality high-molecular-weight RNA....

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Autores principales: Zaker, Sayed Rasoul, Esmaeili, Abolghasem, Bouzari, Majid
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Medknow Publications & Media Pvt Ltd 2014
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3950789/
https://www.ncbi.nlm.nih.gov/pubmed/24627878
http://dx.doi.org/10.4103/2277-9175.125856
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author Zaker, Sayed Rasoul
Esmaeili, Abolghasem
Bouzari, Majid
author_facet Zaker, Sayed Rasoul
Esmaeili, Abolghasem
Bouzari, Majid
author_sort Zaker, Sayed Rasoul
collection PubMed
description BACKGROUND: Gene expression of Gama-Aminobutyric acid (GABA(A)) receptor subunits may change during development. Procedures in molecular biology are required to understand the gene expression profile GABA(A) R in chicken. The outcome of the results depends on good-quality high-molecular-weight RNA. Several procedures can be used to isolate RNA from the brain of chicken; however, most of them are time-consuming and require disruption of cells or freeze and thaw in the presence of RNase inhibitors. The aim of this experiment was isolation of RNA from chicken embryonic brain tissues using appropriate RNA extraction kit. MATERIALS AND METHODS: Fertilized eggs from Ross breed (Gallus gallus) were incubated at 38°C and 60% relative humidity in a forced-draft incubator and were turned every 3 h. After 3, 7, 14 and 20 days of incubation, eggs were cooled on ice to induce deep anesthesia. Then whole brains were dissected out. As brains could not be excised in a reproducible way from earlier embryos (embryonic days 4 and 6), whole heads were collected. Chicken embryos between day 7 to 20 and 1 day after birth were decapitated, and their brains removed. Samples were immediately inserted into lysis buffer and stored at −70°C. Total RNA was isolated and a contaminating genomic deoxyribonucleic acid (DNA) was digested. RNA quality was checked using gel electrophoresis. RESULTS: We obtained 52 mg/ml to 745 mg/ml with A260/280 1.7-2.2. Only high-quality RNA, with no signs of degradation, was used for further experiments. CONCLUSION: In conclusion, protocol was found to be suitable for the isolation of total RNA from embryonic chicken cells.
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spelling pubmed-39507892014-03-13 Extraction of total RNA in the developing chicken forebrain Zaker, Sayed Rasoul Esmaeili, Abolghasem Bouzari, Majid Adv Biomed Res Original Article BACKGROUND: Gene expression of Gama-Aminobutyric acid (GABA(A)) receptor subunits may change during development. Procedures in molecular biology are required to understand the gene expression profile GABA(A) R in chicken. The outcome of the results depends on good-quality high-molecular-weight RNA. Several procedures can be used to isolate RNA from the brain of chicken; however, most of them are time-consuming and require disruption of cells or freeze and thaw in the presence of RNase inhibitors. The aim of this experiment was isolation of RNA from chicken embryonic brain tissues using appropriate RNA extraction kit. MATERIALS AND METHODS: Fertilized eggs from Ross breed (Gallus gallus) were incubated at 38°C and 60% relative humidity in a forced-draft incubator and were turned every 3 h. After 3, 7, 14 and 20 days of incubation, eggs were cooled on ice to induce deep anesthesia. Then whole brains were dissected out. As brains could not be excised in a reproducible way from earlier embryos (embryonic days 4 and 6), whole heads were collected. Chicken embryos between day 7 to 20 and 1 day after birth were decapitated, and their brains removed. Samples were immediately inserted into lysis buffer and stored at −70°C. Total RNA was isolated and a contaminating genomic deoxyribonucleic acid (DNA) was digested. RNA quality was checked using gel electrophoresis. RESULTS: We obtained 52 mg/ml to 745 mg/ml with A260/280 1.7-2.2. Only high-quality RNA, with no signs of degradation, was used for further experiments. CONCLUSION: In conclusion, protocol was found to be suitable for the isolation of total RNA from embryonic chicken cells. Medknow Publications & Media Pvt Ltd 2014-01-27 /pmc/articles/PMC3950789/ /pubmed/24627878 http://dx.doi.org/10.4103/2277-9175.125856 Text en Copyright: © 2014 Zaker. http://creativecommons.org/licenses/by-nc-sa/3.0 This is an open-access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited.
spellingShingle Original Article
Zaker, Sayed Rasoul
Esmaeili, Abolghasem
Bouzari, Majid
Extraction of total RNA in the developing chicken forebrain
title Extraction of total RNA in the developing chicken forebrain
title_full Extraction of total RNA in the developing chicken forebrain
title_fullStr Extraction of total RNA in the developing chicken forebrain
title_full_unstemmed Extraction of total RNA in the developing chicken forebrain
title_short Extraction of total RNA in the developing chicken forebrain
title_sort extraction of total rna in the developing chicken forebrain
topic Original Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3950789/
https://www.ncbi.nlm.nih.gov/pubmed/24627878
http://dx.doi.org/10.4103/2277-9175.125856
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