Cargando…

De Novo Assembly and Annotation of Salvia splendens Transcriptome Using the Illumina Platform

BACKGROUND: As an important perennial herbaceous flower, Salvia splendens possesses high ornamental value. Understanding its branching processes may help scientists select the best plant type. Although Salvia splendens is a frequently-used horticultural flower, only limited transcriptomic or genomic...

Descripción completa

Detalles Bibliográficos
Autores principales:	Ge, Xiuxiu, Chen, Hongwei, Wang, Hongli, Shi, Aiping, Liu, Kefeng
Formato:	Online Artículo Texto
Lenguaje:	English
Publicado:	Public Library of Science 2014
Materias:	Research Article
Acceso en línea:	https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3951189/ https://www.ncbi.nlm.nih.gov/pubmed/24622329 http://dx.doi.org/10.1371/journal.pone.0087693

Ejemplares similares

De Novo Assembly and Annotation of the Chinese Chive (Allium tuberosum Rottler ex Spr.) Transcriptome Using the Illumina Platform
por: Zhou, Shu-Mei, et al.
Publicado: (2015)

Sequencing, De novo Assembly, Functional Annotation and Analysis of Phyllanthus amarus Leaf Transcriptome Using the Illumina Platform
por: Bose Mazumdar, Aparupa, et al.
Publicado: (2016)

Chromosome-scale assembly and evolution of the tetraploid Salvia splendens (Lamiaceae) genome
por: Jia, Kai-Hua, et al.
Publicado: (2021)

Sequencing and de novo assembly of the Asian gypsy moth transcriptome using the Illumina platform
por: Xiaojun, Fan, et al.
Publicado: (2016)

Transcriptome Sequencing and De Novo Analysis of Youngia japonica Using the Illumina Platform
por: Peng, Yulan, et al.
Publicado: (2014)

High-quality assembly of the reference genome for scarlet sage, Salvia splendens, an economically important ornamental plant
por: Dong, Ai-Xiang, et al.
Publicado: (2018)

Alleviation of Ammonium Toxicity in Salvia splendens ‘Vista Red’ with Silicon Supplementation
por: Song, Jinnan, et al.
Publicado: (2022)

De novo transcriptomic analysis of leaf and fruit tissue of Cornus officinalis using Illumina platform
por: Hou, Dian-Yun, et al.
Publicado: (2018)

De Novo Transcriptomic Characterization Enables Novel Microsatellite Identification and Marker Development in Betta splendens
por: Chen, Huapu, et al.
Publicado: (2021)

Illumina short-read sequencing data, de novo assembly and annotations of the Drosophila nasuta nasuta genome
por: DSouza, Stafny, et al.
Publicado: (2020)

De Novo Assembly, Gene Annotation and Marker Development Using Illumina Paired-End Transcriptome Sequences in Celery (Apium graveolens L.)
por: Fu, Nan, et al.
Publicado: (2013)

Ameliorated de novo transcriptome assembly using Illumina paired end sequence data with Trinity Assembler
por: Bankar, Kiran Gopinath, et al.
Publicado: (2015)

Transcriptome analysis of colored calla lily (Zantedeschia rehmannii Engl.) by Illumina sequencing: de novo assembly, annotation and EST-SSR marker development
por: Wei, Zunzheng, et al.
Publicado: (2016)

Comparative transcriptomic analysis provides insights into the development of a Salvia splendens Ker-Gawler mutant, SX919M
por: Dong, Aixiang, et al.
Publicado: (2019)

Heat stress-induced response of the proteomes of leaves from Salvia splendens Vista and King
por: Liu, Hui, et al.
Publicado: (2013)

Transcriptome analysis of Haemaphysalis flava female using Illumina HiSeq 4000 sequencing: de novo assembly, functional annotation and discovery of SSR markers
por: Sang, Min Kyu, et al.
Publicado: (2023)

Transcriptome Sequencing and De Novo Analysis for Ma Bamboo (Dendrocalamus latiflorus Munro) Using the Illumina Platform
por: Liu, Mingying, et al.
Publicado: (2012)

De novo assembly, characterization and annotation for the transcriptome of Sarcocheilichthys sinensis
por: Zhu, Chuankun, et al.
Publicado: (2017)

A simple guide to de novo transcriptome assembly and annotation
por: Raghavan, Venket, et al.
Publicado: (2022)

De Novo Transcriptome Sequencing of Desert Herbaceous Achnatherum splendens (Achnatherum) Seedlings and Identification of Salt Tolerance Genes
por: Liu, Jiangtao, et al.
Publicado: (2016)

Sequencing and De Novo Assembly of the Asian Clam (Corbicula fluminea) Transcriptome Using the Illumina GAIIx Method
por: Chen, Huihui, et al.
Publicado: (2013)

De Novo Assembly and Characterization of the Transcriptome of Seagrass Zostera marina Using Illumina Paired-End Sequencing
por: Kong, Fanna, et al.
Publicado: (2014)

De novo transcriptome assembly and analysis of Sf21 cells using illumina paired end sequencing
por: Kakumani, Pavan Kumar, et al.
Publicado: (2015)

De novo Assembly and Characterization of the Global Transcriptome for Rhyacionia leptotubula Using Illumina Paired-End Sequencing
por: Zhu, Jia-Ying, et al.
Publicado: (2013)

The antihyperglycemic effect of aerial parts of Salvia splendens (scarlet sage) in streptozotocin-induced diabetic-rats
por: Kumar, P. Mahesh, et al.
Publicado: (2010)

Correction: Heat stress-induced response of the proteomes of leaves from Salvia splendens vista and king
por: Liu, Hui, et al.
Publicado: (2013)

De Novo Assembly of Transcriptome and Development of Novel EST-SSR Markers in Rhododendron rex Lévl. through Illumina Sequencing
por: Zhang, Yue, et al.
Publicado: (2017)

Clover: a clustering-oriented de novo assembler for Illumina sequences
por: Hsieh, Ming-Feng, et al.
Publicado: (2020)

De Novo Assembly and Functional Annotation of the Olive (Olea europaea) Transcriptome
por: Muñoz-Mérida, Antonio, et al.
Publicado: (2013)

De novo Assembly and Annotation of the Antarctic Alga Prasiola crispa Transcriptome
por: Carvalho, Evelise L., et al.
Publicado: (2018)

De Novo Transcriptome Assembly and Functional Annotation in Five Species of Bats
por: Moreno-Santillán, Diana D., et al.
Publicado: (2019)

The Rhinella arenarum transcriptome: de novo assembly, annotation and gene prediction
por: Ceschin, Danilo Guillermo, et al.
Publicado: (2020)

De novo transcriptome assembly and gene annotation for the toxic dinoflagellate Dinophysis
por: Gaonkar, Chetan C., et al.
Publicado: (2023)

Transcriptome Profile of the Asian Giant Hornet (Vespa mandarinia) Using Illumina HiSeq 4000 Sequencing: De Novo Assembly, Functional Annotation, and Discovery of SSR Markers
por: Patnaik, Bharat Bhusan, et al.
Publicado: (2016)

De Novo Assembly of Auricularia polytricha Transcriptome Using Illumina Sequencing for Gene Discovery and SSR Marker Identification
por: Zhou, Yan, et al.
Publicado: (2014)

Enhancement of de novo sequencing, assembly and annotation of the Mongolian gerbil genome with transcriptome sequencing and assembly from several different tissues
por: Cheng, Shifeng, et al.
Publicado: (2019)

Illumina and PacBio DNA sequencing data, de novo assembly and annotation of the genome of Aurantiochytrium limacinum strain CCAP_4062/1
por: Morabito, Christian, et al.
Publicado: (2020)

Evaluation of the impact of Illumina error correction tools on de novo genome assembly
por: Heydari, Mahdi, et al.
Publicado: (2017)

Improved annotation with de novo transcriptome assembly in four social amoeba species
por: Singh, Reema, et al.
Publicado: (2017)

IDP-denovo: de novo transcriptome assembly and isoform annotation by hybrid sequencing
por: Fu, Shuhua, et al.
Publicado: (2018)

Cannot write session to /tmp/vufind_sessions/sess_shpo5jp5j9tmcl4p7gifivfkrg