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Prediction of Pharmacokinetic Parameters Using a Genetic Algorithm Combined with an Artificial Neural Network for a Series of Alkaloid Drugs

An important goal for drug development within the pharmaceutical industry is the application of simple methods to determine human pharmacokinetic parameters. Effective computing tools are able to increase scientists’ ability to make precise selections of chemical compounds in accordance with desired...

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Autores principales: Zandkarimi, Majid, Shafiei, Mohammad, Hadizadeh, Farzin, Darbandi, Mohammad Ali, Tabrizian, Kaveh
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Österreichische Apotheker-Verlagsgesellschaft 2014
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3951233/
https://www.ncbi.nlm.nih.gov/pubmed/24634842
http://dx.doi.org/10.3797/scipharm.1306-10
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author Zandkarimi, Majid
Shafiei, Mohammad
Hadizadeh, Farzin
Darbandi, Mohammad Ali
Tabrizian, Kaveh
author_facet Zandkarimi, Majid
Shafiei, Mohammad
Hadizadeh, Farzin
Darbandi, Mohammad Ali
Tabrizian, Kaveh
author_sort Zandkarimi, Majid
collection PubMed
description An important goal for drug development within the pharmaceutical industry is the application of simple methods to determine human pharmacokinetic parameters. Effective computing tools are able to increase scientists’ ability to make precise selections of chemical compounds in accordance with desired pharmacokinetic and safety profiles. This work presents a method for making predictions of the clearance, plasma protein binding, and volume of distribution for alkaloid drugs. The tools used in this method were genetic algorithms (GAs) combined with artificial neural networks (ANNs) and these were applied to select the most relevant molecular descriptors and to develop quantitative structure-pharmacokinetic relationship (QSPkR) models. Results showed that three-dimensional structural descriptors had more influence on QSPkR models. The models developed in this study were able to predict systemic clearance, volume of distribution, and plasma protein binding with normalized root mean square error (NRMSE) values of 0.151, 0.263, and 0.423, respectively. These results demonstrate an acceptable level of efficiency of the developed models for the prediction of pharmacokinetic parameters.
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spelling pubmed-39512332014-03-14 Prediction of Pharmacokinetic Parameters Using a Genetic Algorithm Combined with an Artificial Neural Network for a Series of Alkaloid Drugs Zandkarimi, Majid Shafiei, Mohammad Hadizadeh, Farzin Darbandi, Mohammad Ali Tabrizian, Kaveh Sci Pharm Research Article An important goal for drug development within the pharmaceutical industry is the application of simple methods to determine human pharmacokinetic parameters. Effective computing tools are able to increase scientists’ ability to make precise selections of chemical compounds in accordance with desired pharmacokinetic and safety profiles. This work presents a method for making predictions of the clearance, plasma protein binding, and volume of distribution for alkaloid drugs. The tools used in this method were genetic algorithms (GAs) combined with artificial neural networks (ANNs) and these were applied to select the most relevant molecular descriptors and to develop quantitative structure-pharmacokinetic relationship (QSPkR) models. Results showed that three-dimensional structural descriptors had more influence on QSPkR models. The models developed in this study were able to predict systemic clearance, volume of distribution, and plasma protein binding with normalized root mean square error (NRMSE) values of 0.151, 0.263, and 0.423, respectively. These results demonstrate an acceptable level of efficiency of the developed models for the prediction of pharmacokinetic parameters. Österreichische Apotheker-Verlagsgesellschaft 2014 2013-09-22 /pmc/articles/PMC3951233/ /pubmed/24634842 http://dx.doi.org/10.3797/scipharm.1306-10 Text en © Zandkarimi et al.; licensee Österreichische Apotheker-Verlagsgesellschaft m. b. H., Vienna, Austria. This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/3.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Research Article
Zandkarimi, Majid
Shafiei, Mohammad
Hadizadeh, Farzin
Darbandi, Mohammad Ali
Tabrizian, Kaveh
Prediction of Pharmacokinetic Parameters Using a Genetic Algorithm Combined with an Artificial Neural Network for a Series of Alkaloid Drugs
title Prediction of Pharmacokinetic Parameters Using a Genetic Algorithm Combined with an Artificial Neural Network for a Series of Alkaloid Drugs
title_full Prediction of Pharmacokinetic Parameters Using a Genetic Algorithm Combined with an Artificial Neural Network for a Series of Alkaloid Drugs
title_fullStr Prediction of Pharmacokinetic Parameters Using a Genetic Algorithm Combined with an Artificial Neural Network for a Series of Alkaloid Drugs
title_full_unstemmed Prediction of Pharmacokinetic Parameters Using a Genetic Algorithm Combined with an Artificial Neural Network for a Series of Alkaloid Drugs
title_short Prediction of Pharmacokinetic Parameters Using a Genetic Algorithm Combined with an Artificial Neural Network for a Series of Alkaloid Drugs
title_sort prediction of pharmacokinetic parameters using a genetic algorithm combined with an artificial neural network for a series of alkaloid drugs
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3951233/
https://www.ncbi.nlm.nih.gov/pubmed/24634842
http://dx.doi.org/10.3797/scipharm.1306-10
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