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rAvis: An R-Package for Downloading Information Stored in Proyecto AVIS, a Citizen Science Bird Project

Citizen science projects store an enormous amount of information about species distribution, diversity and characteristics. Researchers are now beginning to make use of this rich collection of data. However, access to these databases is not always straightforward. Apart from the largest and internat...

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Detalles Bibliográficos
Autores principales: Varela, Sara, González-Hernández, Javier, Casabella, Eduardo, Barrientos, Rafael
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Public Library of Science 2014
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3953487/
https://www.ncbi.nlm.nih.gov/pubmed/24626233
http://dx.doi.org/10.1371/journal.pone.0091650
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author Varela, Sara
González-Hernández, Javier
Casabella, Eduardo
Barrientos, Rafael
author_facet Varela, Sara
González-Hernández, Javier
Casabella, Eduardo
Barrientos, Rafael
author_sort Varela, Sara
collection PubMed
description Citizen science projects store an enormous amount of information about species distribution, diversity and characteristics. Researchers are now beginning to make use of this rich collection of data. However, access to these databases is not always straightforward. Apart from the largest and international projects, citizen science repositories often lack specific Application Programming Interfaces (APIs) to connect them to the scientific environments. Thus, it is necessary to develop simple routines to allow researchers to take advantage of the information collected by smaller citizen science projects, for instance, programming specific packages to connect them to popular scientific environments (like R). Here, we present rAvis, an R-package to connect R-users with Proyecto AVIS (http://proyectoavis.com), a Spanish citizen science project with more than 82,000 bird observation records. We develop several functions to explore the database, to plot the geographic distribution of the species occurrences, and to generate personal queries to the database about species occurrences (number of individuals, distribution, etc.) and birdwatcher observations (number of species recorded by each collaborator, UTMs visited, etc.). This new R-package will allow scientists to access this database and to exploit the information generated by Spanish birdwatchers over the last 40 years.
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spelling pubmed-39534872014-03-18 rAvis: An R-Package for Downloading Information Stored in Proyecto AVIS, a Citizen Science Bird Project Varela, Sara González-Hernández, Javier Casabella, Eduardo Barrientos, Rafael PLoS One Research Article Citizen science projects store an enormous amount of information about species distribution, diversity and characteristics. Researchers are now beginning to make use of this rich collection of data. However, access to these databases is not always straightforward. Apart from the largest and international projects, citizen science repositories often lack specific Application Programming Interfaces (APIs) to connect them to the scientific environments. Thus, it is necessary to develop simple routines to allow researchers to take advantage of the information collected by smaller citizen science projects, for instance, programming specific packages to connect them to popular scientific environments (like R). Here, we present rAvis, an R-package to connect R-users with Proyecto AVIS (http://proyectoavis.com), a Spanish citizen science project with more than 82,000 bird observation records. We develop several functions to explore the database, to plot the geographic distribution of the species occurrences, and to generate personal queries to the database about species occurrences (number of individuals, distribution, etc.) and birdwatcher observations (number of species recorded by each collaborator, UTMs visited, etc.). This new R-package will allow scientists to access this database and to exploit the information generated by Spanish birdwatchers over the last 40 years. Public Library of Science 2014-03-13 /pmc/articles/PMC3953487/ /pubmed/24626233 http://dx.doi.org/10.1371/journal.pone.0091650 Text en © 2014 Varela et al http://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are properly credited.
spellingShingle Research Article
Varela, Sara
González-Hernández, Javier
Casabella, Eduardo
Barrientos, Rafael
rAvis: An R-Package for Downloading Information Stored in Proyecto AVIS, a Citizen Science Bird Project
title rAvis: An R-Package for Downloading Information Stored in Proyecto AVIS, a Citizen Science Bird Project
title_full rAvis: An R-Package for Downloading Information Stored in Proyecto AVIS, a Citizen Science Bird Project
title_fullStr rAvis: An R-Package for Downloading Information Stored in Proyecto AVIS, a Citizen Science Bird Project
title_full_unstemmed rAvis: An R-Package for Downloading Information Stored in Proyecto AVIS, a Citizen Science Bird Project
title_short rAvis: An R-Package for Downloading Information Stored in Proyecto AVIS, a Citizen Science Bird Project
title_sort ravis: an r-package for downloading information stored in proyecto avis, a citizen science bird project
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3953487/
https://www.ncbi.nlm.nih.gov/pubmed/24626233
http://dx.doi.org/10.1371/journal.pone.0091650
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