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rAvis: An R-Package for Downloading Information Stored in Proyecto AVIS, a Citizen Science Bird Project
Citizen science projects store an enormous amount of information about species distribution, diversity and characteristics. Researchers are now beginning to make use of this rich collection of data. However, access to these databases is not always straightforward. Apart from the largest and internat...
Autores principales: | , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Public Library of Science
2014
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3953487/ https://www.ncbi.nlm.nih.gov/pubmed/24626233 http://dx.doi.org/10.1371/journal.pone.0091650 |
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author | Varela, Sara González-Hernández, Javier Casabella, Eduardo Barrientos, Rafael |
author_facet | Varela, Sara González-Hernández, Javier Casabella, Eduardo Barrientos, Rafael |
author_sort | Varela, Sara |
collection | PubMed |
description | Citizen science projects store an enormous amount of information about species distribution, diversity and characteristics. Researchers are now beginning to make use of this rich collection of data. However, access to these databases is not always straightforward. Apart from the largest and international projects, citizen science repositories often lack specific Application Programming Interfaces (APIs) to connect them to the scientific environments. Thus, it is necessary to develop simple routines to allow researchers to take advantage of the information collected by smaller citizen science projects, for instance, programming specific packages to connect them to popular scientific environments (like R). Here, we present rAvis, an R-package to connect R-users with Proyecto AVIS (http://proyectoavis.com), a Spanish citizen science project with more than 82,000 bird observation records. We develop several functions to explore the database, to plot the geographic distribution of the species occurrences, and to generate personal queries to the database about species occurrences (number of individuals, distribution, etc.) and birdwatcher observations (number of species recorded by each collaborator, UTMs visited, etc.). This new R-package will allow scientists to access this database and to exploit the information generated by Spanish birdwatchers over the last 40 years. |
format | Online Article Text |
id | pubmed-3953487 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2014 |
publisher | Public Library of Science |
record_format | MEDLINE/PubMed |
spelling | pubmed-39534872014-03-18 rAvis: An R-Package for Downloading Information Stored in Proyecto AVIS, a Citizen Science Bird Project Varela, Sara González-Hernández, Javier Casabella, Eduardo Barrientos, Rafael PLoS One Research Article Citizen science projects store an enormous amount of information about species distribution, diversity and characteristics. Researchers are now beginning to make use of this rich collection of data. However, access to these databases is not always straightforward. Apart from the largest and international projects, citizen science repositories often lack specific Application Programming Interfaces (APIs) to connect them to the scientific environments. Thus, it is necessary to develop simple routines to allow researchers to take advantage of the information collected by smaller citizen science projects, for instance, programming specific packages to connect them to popular scientific environments (like R). Here, we present rAvis, an R-package to connect R-users with Proyecto AVIS (http://proyectoavis.com), a Spanish citizen science project with more than 82,000 bird observation records. We develop several functions to explore the database, to plot the geographic distribution of the species occurrences, and to generate personal queries to the database about species occurrences (number of individuals, distribution, etc.) and birdwatcher observations (number of species recorded by each collaborator, UTMs visited, etc.). This new R-package will allow scientists to access this database and to exploit the information generated by Spanish birdwatchers over the last 40 years. Public Library of Science 2014-03-13 /pmc/articles/PMC3953487/ /pubmed/24626233 http://dx.doi.org/10.1371/journal.pone.0091650 Text en © 2014 Varela et al http://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are properly credited. |
spellingShingle | Research Article Varela, Sara González-Hernández, Javier Casabella, Eduardo Barrientos, Rafael rAvis: An R-Package for Downloading Information Stored in Proyecto AVIS, a Citizen Science Bird Project |
title | rAvis: An R-Package for Downloading Information Stored in Proyecto AVIS, a Citizen Science Bird Project |
title_full | rAvis: An R-Package for Downloading Information Stored in Proyecto AVIS, a Citizen Science Bird Project |
title_fullStr | rAvis: An R-Package for Downloading Information Stored in Proyecto AVIS, a Citizen Science Bird Project |
title_full_unstemmed | rAvis: An R-Package for Downloading Information Stored in Proyecto AVIS, a Citizen Science Bird Project |
title_short | rAvis: An R-Package for Downloading Information Stored in Proyecto AVIS, a Citizen Science Bird Project |
title_sort | ravis: an r-package for downloading information stored in proyecto avis, a citizen science bird project |
topic | Research Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3953487/ https://www.ncbi.nlm.nih.gov/pubmed/24626233 http://dx.doi.org/10.1371/journal.pone.0091650 |
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