KEGGViewer, a BioJS component to visualize KEGG Pathways

Summary: Signaling pathways provide essential information on complex regulatory processes within the cell. They are moreover widely used to interpret and integrate data from large-scale studies, such as expression or functional screens. We present KEGGViewer a BioJS component to visualize KEGG pathw...

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Detalles Bibliográficos
Autores principales: Villaveces, Jose M., Jimenez, Rafael C., Habermann, Bianca H.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: F1000Research 2014
Materias:
Web Tool
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3954160/
https://www.ncbi.nlm.nih.gov/pubmed/24715980
http://dx.doi.org/10.12688/f1000research.3-43.v1
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author Villaveces, Jose M.
Jimenez, Rafael C.
Habermann, Bianca H.
author_facet Villaveces, Jose M.
Jimenez, Rafael C.
Habermann, Bianca H.
author_sort Villaveces, Jose M.
collection PubMed
description Summary: Signaling pathways provide essential information on complex regulatory processes within the cell. They are moreover widely used to interpret and integrate data from large-scale studies, such as expression or functional screens. We present KEGGViewer a BioJS component to visualize KEGG pathways and to allow their visual integration with functional data. Availability: KEGGViewer is an open-source tool freely available at the BioJS Registry. Instructions on how to use the tool are available at http://goo.gl/dVeWpg and the source code can be found at http://github.com/biojs/biojs and DOI: 10.5281/zenodo.7708.
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spelling pubmed-39541602014-04-07 KEGGViewer, a BioJS component to visualize KEGG Pathways Villaveces, Jose M. Jimenez, Rafael C. Habermann, Bianca H. F1000Res Web Tool Summary: Signaling pathways provide essential information on complex regulatory processes within the cell. They are moreover widely used to interpret and integrate data from large-scale studies, such as expression or functional screens. We present KEGGViewer a BioJS component to visualize KEGG pathways and to allow their visual integration with functional data. Availability: KEGGViewer is an open-source tool freely available at the BioJS Registry. Instructions on how to use the tool are available at http://goo.gl/dVeWpg and the source code can be found at http://github.com/biojs/biojs and DOI: 10.5281/zenodo.7708. F1000Research 2014-02-13 /pmc/articles/PMC3954160/ /pubmed/24715980 http://dx.doi.org/10.12688/f1000research.3-43.v1 Text en Copyright: © 2014 Villaveces JM et al. http://creativecommons.org/licenses/by/3.0/ This is an open access article distributed under the terms of the Creative Commons Attribution Licence, which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Web Tool
Villaveces, Jose M.
Jimenez, Rafael C.
Habermann, Bianca H.
KEGGViewer, a BioJS component to visualize KEGG Pathways
title KEGGViewer, a BioJS component to visualize KEGG Pathways
title_full KEGGViewer, a BioJS component to visualize KEGG Pathways
title_fullStr KEGGViewer, a BioJS component to visualize KEGG Pathways
title_full_unstemmed KEGGViewer, a BioJS component to visualize KEGG Pathways
title_short KEGGViewer, a BioJS component to visualize KEGG Pathways
title_sort keggviewer, a biojs component to visualize kegg pathways
topic Web Tool
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3954160/
https://www.ncbi.nlm.nih.gov/pubmed/24715980
http://dx.doi.org/10.12688/f1000research.3-43.v1
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AT jimenezrafaelc keggviewerabiojscomponenttovisualizekeggpathways
AT habermannbiancah keggviewerabiojscomponenttovisualizekeggpathways

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