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A Molecular Genetic Linkage Map of Eucommia ulmoides and Quantitative Trait Loci (QTL) Analysis for Growth Traits

Eucommia ulmoides is an economically important tree species for both herbal medicine and organic chemical industry. Effort to breed varieties with improved yield and quality is limited by the lack of knowledge on the genetic basis of the traits. A genetic linkage map of E. ulmoides was constructed f...

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Detalles Bibliográficos
Autores principales: Li, Yu, Wang, Dawei, Li, Zhouqi, Wei, Junkun, Jin, Cangfu, Liu, Minhao
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Molecular Diversity Preservation International (MDPI) 2014
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3958837/
https://www.ncbi.nlm.nih.gov/pubmed/24477264
http://dx.doi.org/10.3390/ijms15022053
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author Li, Yu
Wang, Dawei
Li, Zhouqi
Wei, Junkun
Jin, Cangfu
Liu, Minhao
author_facet Li, Yu
Wang, Dawei
Li, Zhouqi
Wei, Junkun
Jin, Cangfu
Liu, Minhao
author_sort Li, Yu
collection PubMed
description Eucommia ulmoides is an economically important tree species for both herbal medicine and organic chemical industry. Effort to breed varieties with improved yield and quality is limited by the lack of knowledge on the genetic basis of the traits. A genetic linkage map of E. ulmoides was constructed from a full-sib family using sequence-related amplified polymorphism, amplified fragment length polymorphism, inter-simple sequence repeat and simple sequence repeat markers. In total, 706 markers were mapped in 25 linkage groups covering 2133 cM. The genetic linkage map covered approximately 89% of the estimated E. ulmoides genome with an average of 3.1 cM between adjacent markers. The present genetic linkage map was used to identify quantitative trait loci (QTL) affecting growth-related traits. Eighteen QTLs were found to explain 12.4%–33.3% of the phenotypic variance. This genetic linkage map provides a tool for marker-assisted selection and for studies of genome in E. ulmoides.
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spelling pubmed-39588372014-03-20 A Molecular Genetic Linkage Map of Eucommia ulmoides and Quantitative Trait Loci (QTL) Analysis for Growth Traits Li, Yu Wang, Dawei Li, Zhouqi Wei, Junkun Jin, Cangfu Liu, Minhao Int J Mol Sci Article Eucommia ulmoides is an economically important tree species for both herbal medicine and organic chemical industry. Effort to breed varieties with improved yield and quality is limited by the lack of knowledge on the genetic basis of the traits. A genetic linkage map of E. ulmoides was constructed from a full-sib family using sequence-related amplified polymorphism, amplified fragment length polymorphism, inter-simple sequence repeat and simple sequence repeat markers. In total, 706 markers were mapped in 25 linkage groups covering 2133 cM. The genetic linkage map covered approximately 89% of the estimated E. ulmoides genome with an average of 3.1 cM between adjacent markers. The present genetic linkage map was used to identify quantitative trait loci (QTL) affecting growth-related traits. Eighteen QTLs were found to explain 12.4%–33.3% of the phenotypic variance. This genetic linkage map provides a tool for marker-assisted selection and for studies of genome in E. ulmoides. Molecular Diversity Preservation International (MDPI) 2014-01-28 /pmc/articles/PMC3958837/ /pubmed/24477264 http://dx.doi.org/10.3390/ijms15022053 Text en © 2014 by the authors; licensee MDPI, Basel, Switzerland http://creativecommons.org/licenses/by/3.0/ This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution license (http://creativecommons.org/licenses/by/3.0/).
spellingShingle Article
Li, Yu
Wang, Dawei
Li, Zhouqi
Wei, Junkun
Jin, Cangfu
Liu, Minhao
A Molecular Genetic Linkage Map of Eucommia ulmoides and Quantitative Trait Loci (QTL) Analysis for Growth Traits
title A Molecular Genetic Linkage Map of Eucommia ulmoides and Quantitative Trait Loci (QTL) Analysis for Growth Traits
title_full A Molecular Genetic Linkage Map of Eucommia ulmoides and Quantitative Trait Loci (QTL) Analysis for Growth Traits
title_fullStr A Molecular Genetic Linkage Map of Eucommia ulmoides and Quantitative Trait Loci (QTL) Analysis for Growth Traits
title_full_unstemmed A Molecular Genetic Linkage Map of Eucommia ulmoides and Quantitative Trait Loci (QTL) Analysis for Growth Traits
title_short A Molecular Genetic Linkage Map of Eucommia ulmoides and Quantitative Trait Loci (QTL) Analysis for Growth Traits
title_sort molecular genetic linkage map of eucommia ulmoides and quantitative trait loci (qtl) analysis for growth traits
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3958837/
https://www.ncbi.nlm.nih.gov/pubmed/24477264
http://dx.doi.org/10.3390/ijms15022053
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