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Semi-Automatic Classification of Birdsong Elements Using a Linear Support Vector Machine

Birdsong provides a unique model for understanding the behavioral and neural bases underlying complex sequential behaviors. However, birdsong analyses require laborious effort to make the data quantitatively analyzable. The previous attempts had succeeded to provide some reduction of human efforts i...

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Autores principales: Tachibana, Ryosuke O., Oosugi, Naoya, Okanoya, Kazuo
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Public Library of Science 2014
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3962446/
https://www.ncbi.nlm.nih.gov/pubmed/24658578
http://dx.doi.org/10.1371/journal.pone.0092584
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author Tachibana, Ryosuke O.
Oosugi, Naoya
Okanoya, Kazuo
author_facet Tachibana, Ryosuke O.
Oosugi, Naoya
Okanoya, Kazuo
author_sort Tachibana, Ryosuke O.
collection PubMed
description Birdsong provides a unique model for understanding the behavioral and neural bases underlying complex sequential behaviors. However, birdsong analyses require laborious effort to make the data quantitatively analyzable. The previous attempts had succeeded to provide some reduction of human efforts involved in birdsong segment classification. The present study was aimed to further reduce human efforts while increasing classification performance. In the current proposal, a linear-kernel support vector machine was employed to minimize the amount of human-generated label samples for reliable element classification in birdsong, and to enable the classifier to handle highly-dimensional acoustic features while avoiding the over-fitting problem. Bengalese finch's songs in which distinct elements (i.e., syllables) were aligned in a complex sequential pattern were used as a representative test case in the neuroscientific research field. Three evaluations were performed to test (1) algorithm validity and accuracy with exploring appropriate classifier settings, (2) capability to provide accuracy with reducing amount of instruction dataset, and (3) capability in classifying large dataset with minimized manual labeling. The results from the evaluation (1) showed that the algorithm is 99.5% reliable in song syllables classification. This accuracy was indeed maintained in evaluation (2), even when the instruction data classified by human were reduced to one-minute excerpt (corresponding to 300–400 syllables) for classifying two-minute excerpt. The reliability remained comparable, 98.7% accuracy, when a large target dataset of whole day recordings (∼30,000 syllables) was used. Use of a linear-kernel support vector machine showed sufficient accuracies with minimized manually generated instruction data in bird song element classification. The methodology proposed would help reducing laborious processes in birdsong analysis without sacrificing reliability, and therefore can help accelerating behavior and studies using songbirds.
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spelling pubmed-39624462014-03-24 Semi-Automatic Classification of Birdsong Elements Using a Linear Support Vector Machine Tachibana, Ryosuke O. Oosugi, Naoya Okanoya, Kazuo PLoS One Research Article Birdsong provides a unique model for understanding the behavioral and neural bases underlying complex sequential behaviors. However, birdsong analyses require laborious effort to make the data quantitatively analyzable. The previous attempts had succeeded to provide some reduction of human efforts involved in birdsong segment classification. The present study was aimed to further reduce human efforts while increasing classification performance. In the current proposal, a linear-kernel support vector machine was employed to minimize the amount of human-generated label samples for reliable element classification in birdsong, and to enable the classifier to handle highly-dimensional acoustic features while avoiding the over-fitting problem. Bengalese finch's songs in which distinct elements (i.e., syllables) were aligned in a complex sequential pattern were used as a representative test case in the neuroscientific research field. Three evaluations were performed to test (1) algorithm validity and accuracy with exploring appropriate classifier settings, (2) capability to provide accuracy with reducing amount of instruction dataset, and (3) capability in classifying large dataset with minimized manual labeling. The results from the evaluation (1) showed that the algorithm is 99.5% reliable in song syllables classification. This accuracy was indeed maintained in evaluation (2), even when the instruction data classified by human were reduced to one-minute excerpt (corresponding to 300–400 syllables) for classifying two-minute excerpt. The reliability remained comparable, 98.7% accuracy, when a large target dataset of whole day recordings (∼30,000 syllables) was used. Use of a linear-kernel support vector machine showed sufficient accuracies with minimized manually generated instruction data in bird song element classification. The methodology proposed would help reducing laborious processes in birdsong analysis without sacrificing reliability, and therefore can help accelerating behavior and studies using songbirds. Public Library of Science 2014-03-21 /pmc/articles/PMC3962446/ /pubmed/24658578 http://dx.doi.org/10.1371/journal.pone.0092584 Text en © 2014 Tachibana et al http://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are properly credited.
spellingShingle Research Article
Tachibana, Ryosuke O.
Oosugi, Naoya
Okanoya, Kazuo
Semi-Automatic Classification of Birdsong Elements Using a Linear Support Vector Machine
title Semi-Automatic Classification of Birdsong Elements Using a Linear Support Vector Machine
title_full Semi-Automatic Classification of Birdsong Elements Using a Linear Support Vector Machine
title_fullStr Semi-Automatic Classification of Birdsong Elements Using a Linear Support Vector Machine
title_full_unstemmed Semi-Automatic Classification of Birdsong Elements Using a Linear Support Vector Machine
title_short Semi-Automatic Classification of Birdsong Elements Using a Linear Support Vector Machine
title_sort semi-automatic classification of birdsong elements using a linear support vector machine
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3962446/
https://www.ncbi.nlm.nih.gov/pubmed/24658578
http://dx.doi.org/10.1371/journal.pone.0092584
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