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The BioCASe Monitor Service - A tool for monitoring progress and quality of data provision through distributed data networks

Abstract. The BioCASe Monitor Service (BMS) is a web-based tool for coordinators of distributed data networks that provide information to web-portals and data aggregators via the BioCASe Provider Software. Building on common standards and protocols, it has three main purposes: (1) monitoring provide...

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Detalles Bibliográficos
Autores principales: Glöckler, Falko, Hoffmann, Jana, Theeten, Franck
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Pensoft Publishers 2013
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3964725/
https://www.ncbi.nlm.nih.gov/pubmed/24723764
http://dx.doi.org/10.3897/BDJ.1.e968
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author Glöckler, Falko
Hoffmann, Jana
Theeten, Franck
author_facet Glöckler, Falko
Hoffmann, Jana
Theeten, Franck
author_sort Glöckler, Falko
collection PubMed
description Abstract. The BioCASe Monitor Service (BMS) is a web-based tool for coordinators of distributed data networks that provide information to web-portals and data aggregators via the BioCASe Provider Software. Building on common standards and protocols, it has three main purposes: (1) monitoring provider’s progress in data provision, (2) facilitating checks of data mappings with a focus on the structure, plausibility and completeness, and (3) verifying compliance of provided data for transformation into other target schemas. Herein two use cases, GBIF-D and OpenUp!, are presented in which the BMS is being applied for monitoring the progress in data provision and performing quality checks on the ABCD (Access to Biological Collection Data) schema mapping. However, the BMS can potentially be used with any conceptual data schema and protocols for querying web services. Through flexible configuration options it is highly adaptable to specific requirements and needs. Thus, the BMS can be easily implemented into coordination workflows and reporting duties within other distributed data network projects.
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spelling pubmed-39647252014-04-10 The BioCASe Monitor Service - A tool for monitoring progress and quality of data provision through distributed data networks Glöckler, Falko Hoffmann, Jana Theeten, Franck Biodivers Data J Bioinformatics Abstract. The BioCASe Monitor Service (BMS) is a web-based tool for coordinators of distributed data networks that provide information to web-portals and data aggregators via the BioCASe Provider Software. Building on common standards and protocols, it has three main purposes: (1) monitoring provider’s progress in data provision, (2) facilitating checks of data mappings with a focus on the structure, plausibility and completeness, and (3) verifying compliance of provided data for transformation into other target schemas. Herein two use cases, GBIF-D and OpenUp!, are presented in which the BMS is being applied for monitoring the progress in data provision and performing quality checks on the ABCD (Access to Biological Collection Data) schema mapping. However, the BMS can potentially be used with any conceptual data schema and protocols for querying web services. Through flexible configuration options it is highly adaptable to specific requirements and needs. Thus, the BMS can be easily implemented into coordination workflows and reporting duties within other distributed data network projects. Pensoft Publishers 2013-09-16 /pmc/articles/PMC3964725/ /pubmed/24723764 http://dx.doi.org/10.3897/BDJ.1.e968 Text en Falko Glöckler, Jana Hoffmann, Franck Theeten http://creativecommons.org/licenses/by/3.0 This is an open access article distributed under the terms of the Creative Commons Attribution License 3.0 (CC-BY), which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited.
spellingShingle Bioinformatics
Glöckler, Falko
Hoffmann, Jana
Theeten, Franck
The BioCASe Monitor Service - A tool for monitoring progress and quality of data provision through distributed data networks
title The BioCASe Monitor Service - A tool for monitoring progress and quality of data provision through distributed data networks
title_full The BioCASe Monitor Service - A tool for monitoring progress and quality of data provision through distributed data networks
title_fullStr The BioCASe Monitor Service - A tool for monitoring progress and quality of data provision through distributed data networks
title_full_unstemmed The BioCASe Monitor Service - A tool for monitoring progress and quality of data provision through distributed data networks
title_short The BioCASe Monitor Service - A tool for monitoring progress and quality of data provision through distributed data networks
title_sort biocase monitor service - a tool for monitoring progress and quality of data provision through distributed data networks
topic Bioinformatics
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3964725/
https://www.ncbi.nlm.nih.gov/pubmed/24723764
http://dx.doi.org/10.3897/BDJ.1.e968
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