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CentrosomeDB: a new generation of the centrosomal proteins database for Human and Drosophila melanogaster
We present the second generation of centrosomeDB, available online at http://centrosome.cnb.csic.es, with a significant expansion of 1357 human and drosophila centrosomal genes and their corresponding information. The centrosome of animal cells takes part in important biological processes such as th...
Autores principales: | , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Oxford University Press
2014
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3964966/ https://www.ncbi.nlm.nih.gov/pubmed/24270791 http://dx.doi.org/10.1093/nar/gkt1126 |
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author | Alves-Cruzeiro, Joao Miguel da Conceiçao Nogales-Cadenas, Rubén Pascual-Montano, Alberto Domingo |
author_facet | Alves-Cruzeiro, Joao Miguel da Conceiçao Nogales-Cadenas, Rubén Pascual-Montano, Alberto Domingo |
author_sort | Alves-Cruzeiro, Joao Miguel da Conceiçao |
collection | PubMed |
description | We present the second generation of centrosomeDB, available online at http://centrosome.cnb.csic.es, with a significant expansion of 1357 human and drosophila centrosomal genes and their corresponding information. The centrosome of animal cells takes part in important biological processes such as the organization of the interphase microtubule cytoskeleton and the assembly of the mitotic spindle. The active research done during the past decades has produced lots of data related to centrosomal proteins. Unfortunately, the accumulated data are dispersed among diverse and heterogeneous sources of information. We believe that the availability of a repository collecting curated evidences of centrosomal proteins would constitute a key resource for the scientific community. This was our first motivation to introduce CentrosomeDB in NAR database issue in 2009, collecting a set of human centrosomal proteins that were reported in the literature and other sources. The intensive use of this resource during these years has encouraged us to present this new expanded version. Using our database, the researcher is offered the possibility to study the evolution, function and structure of the centrosome. We have compiled information from many sources, including Gene Ontology, disease-association, single nucleotide polymorphisms and associated gene expression experiments. Special interest has been paid to protein–protein interaction. |
format | Online Article Text |
id | pubmed-3964966 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2014 |
publisher | Oxford University Press |
record_format | MEDLINE/PubMed |
spelling | pubmed-39649662014-03-25 CentrosomeDB: a new generation of the centrosomal proteins database for Human and Drosophila melanogaster Alves-Cruzeiro, Joao Miguel da Conceiçao Nogales-Cadenas, Rubén Pascual-Montano, Alberto Domingo Nucleic Acids Res II. Protein sequence and structure, motifs and domains We present the second generation of centrosomeDB, available online at http://centrosome.cnb.csic.es, with a significant expansion of 1357 human and drosophila centrosomal genes and their corresponding information. The centrosome of animal cells takes part in important biological processes such as the organization of the interphase microtubule cytoskeleton and the assembly of the mitotic spindle. The active research done during the past decades has produced lots of data related to centrosomal proteins. Unfortunately, the accumulated data are dispersed among diverse and heterogeneous sources of information. We believe that the availability of a repository collecting curated evidences of centrosomal proteins would constitute a key resource for the scientific community. This was our first motivation to introduce CentrosomeDB in NAR database issue in 2009, collecting a set of human centrosomal proteins that were reported in the literature and other sources. The intensive use of this resource during these years has encouraged us to present this new expanded version. Using our database, the researcher is offered the possibility to study the evolution, function and structure of the centrosome. We have compiled information from many sources, including Gene Ontology, disease-association, single nucleotide polymorphisms and associated gene expression experiments. Special interest has been paid to protein–protein interaction. Oxford University Press 2014-01-01 2013-11-21 /pmc/articles/PMC3964966/ /pubmed/24270791 http://dx.doi.org/10.1093/nar/gkt1126 Text en © The Author(s) 2013. Published by Oxford University Press. http://creativecommons.org/licenses/by/3.0/ This is an Open Access article distributed under the terms of the Creative Commons Attribution Non-Commercial License (http://creativecommons.org/licenses/by/3.0/), which permits non-commercial reuse, distribution, and reproduction in any medium, provided the original work is properly cited. For commercial re-use, please contact journals.permissions@oup.com |
spellingShingle | II. Protein sequence and structure, motifs and domains Alves-Cruzeiro, Joao Miguel da Conceiçao Nogales-Cadenas, Rubén Pascual-Montano, Alberto Domingo CentrosomeDB: a new generation of the centrosomal proteins database for Human and Drosophila melanogaster |
title | CentrosomeDB: a new generation of the centrosomal proteins database for Human and Drosophila melanogaster |
title_full | CentrosomeDB: a new generation of the centrosomal proteins database for Human and Drosophila melanogaster |
title_fullStr | CentrosomeDB: a new generation of the centrosomal proteins database for Human and Drosophila melanogaster |
title_full_unstemmed | CentrosomeDB: a new generation of the centrosomal proteins database for Human and Drosophila melanogaster |
title_short | CentrosomeDB: a new generation of the centrosomal proteins database for Human and Drosophila melanogaster |
title_sort | centrosomedb: a new generation of the centrosomal proteins database for human and drosophila melanogaster |
topic | II. Protein sequence and structure, motifs and domains |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3964966/ https://www.ncbi.nlm.nih.gov/pubmed/24270791 http://dx.doi.org/10.1093/nar/gkt1126 |
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