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CentrosomeDB: a new generation of the centrosomal proteins database for Human and Drosophila melanogaster

We present the second generation of centrosomeDB, available online at http://centrosome.cnb.csic.es, with a significant expansion of 1357 human and drosophila centrosomal genes and their corresponding information. The centrosome of animal cells takes part in important biological processes such as th...

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Autores principales: Alves-Cruzeiro, Joao Miguel da Conceiçao, Nogales-Cadenas, Rubén, Pascual-Montano, Alberto Domingo
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Oxford University Press 2014
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3964966/
https://www.ncbi.nlm.nih.gov/pubmed/24270791
http://dx.doi.org/10.1093/nar/gkt1126
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author Alves-Cruzeiro, Joao Miguel da Conceiçao
Nogales-Cadenas, Rubén
Pascual-Montano, Alberto Domingo
author_facet Alves-Cruzeiro, Joao Miguel da Conceiçao
Nogales-Cadenas, Rubén
Pascual-Montano, Alberto Domingo
author_sort Alves-Cruzeiro, Joao Miguel da Conceiçao
collection PubMed
description We present the second generation of centrosomeDB, available online at http://centrosome.cnb.csic.es, with a significant expansion of 1357 human and drosophila centrosomal genes and their corresponding information. The centrosome of animal cells takes part in important biological processes such as the organization of the interphase microtubule cytoskeleton and the assembly of the mitotic spindle. The active research done during the past decades has produced lots of data related to centrosomal proteins. Unfortunately, the accumulated data are dispersed among diverse and heterogeneous sources of information. We believe that the availability of a repository collecting curated evidences of centrosomal proteins would constitute a key resource for the scientific community. This was our first motivation to introduce CentrosomeDB in NAR database issue in 2009, collecting a set of human centrosomal proteins that were reported in the literature and other sources. The intensive use of this resource during these years has encouraged us to present this new expanded version. Using our database, the researcher is offered the possibility to study the evolution, function and structure of the centrosome. We have compiled information from many sources, including Gene Ontology, disease-association, single nucleotide polymorphisms and associated gene expression experiments. Special interest has been paid to protein–protein interaction.
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spelling pubmed-39649662014-03-25 CentrosomeDB: a new generation of the centrosomal proteins database for Human and Drosophila melanogaster Alves-Cruzeiro, Joao Miguel da Conceiçao Nogales-Cadenas, Rubén Pascual-Montano, Alberto Domingo Nucleic Acids Res II. Protein sequence and structure, motifs and domains We present the second generation of centrosomeDB, available online at http://centrosome.cnb.csic.es, with a significant expansion of 1357 human and drosophila centrosomal genes and their corresponding information. The centrosome of animal cells takes part in important biological processes such as the organization of the interphase microtubule cytoskeleton and the assembly of the mitotic spindle. The active research done during the past decades has produced lots of data related to centrosomal proteins. Unfortunately, the accumulated data are dispersed among diverse and heterogeneous sources of information. We believe that the availability of a repository collecting curated evidences of centrosomal proteins would constitute a key resource for the scientific community. This was our first motivation to introduce CentrosomeDB in NAR database issue in 2009, collecting a set of human centrosomal proteins that were reported in the literature and other sources. The intensive use of this resource during these years has encouraged us to present this new expanded version. Using our database, the researcher is offered the possibility to study the evolution, function and structure of the centrosome. We have compiled information from many sources, including Gene Ontology, disease-association, single nucleotide polymorphisms and associated gene expression experiments. Special interest has been paid to protein–protein interaction. Oxford University Press 2014-01-01 2013-11-21 /pmc/articles/PMC3964966/ /pubmed/24270791 http://dx.doi.org/10.1093/nar/gkt1126 Text en © The Author(s) 2013. Published by Oxford University Press. http://creativecommons.org/licenses/by/3.0/ This is an Open Access article distributed under the terms of the Creative Commons Attribution Non-Commercial License (http://creativecommons.org/licenses/by/3.0/), which permits non-commercial reuse, distribution, and reproduction in any medium, provided the original work is properly cited. For commercial re-use, please contact journals.permissions@oup.com
spellingShingle II. Protein sequence and structure, motifs and domains
Alves-Cruzeiro, Joao Miguel da Conceiçao
Nogales-Cadenas, Rubén
Pascual-Montano, Alberto Domingo
CentrosomeDB: a new generation of the centrosomal proteins database for Human and Drosophila melanogaster
title CentrosomeDB: a new generation of the centrosomal proteins database for Human and Drosophila melanogaster
title_full CentrosomeDB: a new generation of the centrosomal proteins database for Human and Drosophila melanogaster
title_fullStr CentrosomeDB: a new generation of the centrosomal proteins database for Human and Drosophila melanogaster
title_full_unstemmed CentrosomeDB: a new generation of the centrosomal proteins database for Human and Drosophila melanogaster
title_short CentrosomeDB: a new generation of the centrosomal proteins database for Human and Drosophila melanogaster
title_sort centrosomedb: a new generation of the centrosomal proteins database for human and drosophila melanogaster
topic II. Protein sequence and structure, motifs and domains
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3964966/
https://www.ncbi.nlm.nih.gov/pubmed/24270791
http://dx.doi.org/10.1093/nar/gkt1126
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