The Nucleic Acid Database: new features and capabilities

The Nucleic Acid Database (NDB) (http://ndbserver.rutgers.edu) is a web portal providing access to information about 3D nucleic acid structures and their complexes. In addition to primary data, the NDB contains derived geometric data, classifications of structures and motifs, standards for describin...

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Detalles Bibliográficos
Autores principales: Coimbatore Narayanan, Buvaneswari, Westbrook, John, Ghosh, Saheli, Petrov, Anton I., Sweeney, Blake, Zirbel, Craig L., Leontis, Neocles B., Berman, Helen M.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Oxford University Press 2014
Materias:
I. Nucleic acid sequence, structure and regulation
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3964972/
https://www.ncbi.nlm.nih.gov/pubmed/24185695
http://dx.doi.org/10.1093/nar/gkt980
Descripción
Sumario:The Nucleic Acid Database (NDB) (http://ndbserver.rutgers.edu) is a web portal providing access to information about 3D nucleic acid structures and their complexes. In addition to primary data, the NDB contains derived geometric data, classifications of structures and motifs, standards for describing nucleic acid features, as well as tools and software for the analysis of nucleic acids. A variety of search capabilities are available, as are many different types of reports. This article describes the recent redesign of the NDB Web site with special emphasis on new RNA-derived data and annotations and their implementation and integration into the search capabilities.

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