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RiceWiki: a wiki-based database for community curation of rice genes

Rice is the most important staple food for a large part of the world’s human population and also a key model organism for biological studies of crops as well as other related plants. Here we present RiceWiki (http://ricewiki.big.ac.cn), a wiki-based, publicly editable and open-content platform for c...

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Autores principales: Zhang, Zhang, Sang, Jian, Ma, Lina, Wu, Gang, Wu, Hao, Huang, Dawei, Zou, Dong, Liu, Siqi, Li, Ang, Hao, Lili, Tian, Ming, Xu, Chao, Wang, Xumin, Wu, Jiayan, Xiao, Jingfa, Dai, Lin, Chen, Ling-Ling, Hu, Songnian, Yu, Jun
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Oxford University Press 2014
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3964990/
https://www.ncbi.nlm.nih.gov/pubmed/24136999
http://dx.doi.org/10.1093/nar/gkt926
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author Zhang, Zhang
Sang, Jian
Ma, Lina
Wu, Gang
Wu, Hao
Huang, Dawei
Zou, Dong
Liu, Siqi
Li, Ang
Hao, Lili
Tian, Ming
Xu, Chao
Wang, Xumin
Wu, Jiayan
Xiao, Jingfa
Dai, Lin
Chen, Ling-Ling
Hu, Songnian
Yu, Jun
author_facet Zhang, Zhang
Sang, Jian
Ma, Lina
Wu, Gang
Wu, Hao
Huang, Dawei
Zou, Dong
Liu, Siqi
Li, Ang
Hao, Lili
Tian, Ming
Xu, Chao
Wang, Xumin
Wu, Jiayan
Xiao, Jingfa
Dai, Lin
Chen, Ling-Ling
Hu, Songnian
Yu, Jun
author_sort Zhang, Zhang
collection PubMed
description Rice is the most important staple food for a large part of the world’s human population and also a key model organism for biological studies of crops as well as other related plants. Here we present RiceWiki (http://ricewiki.big.ac.cn), a wiki-based, publicly editable and open-content platform for community curation of rice genes. Most existing related biological databases are based on expert curation; with the exponentially exploding volume of rice knowledge and other relevant data, however, expert curation becomes increasingly laborious and time-consuming to keep knowledge up-to-date, accurate and comprehensive, struggling with the flood of data and requiring a large number of people getting involved in rice knowledge curation. Unlike extant relevant databases, RiceWiki features harnessing collective intelligence in community curation of rice genes, quantifying users' contributions in each curated gene and providing explicit authorship for each contributor in any given gene, with the aim to exploit the full potential of the scientific community for rice knowledge curation. Based on community curation, RiceWiki bears the potential to make it possible to build a rice encyclopedia by and for the scientific community that harnesses community intelligence for collaborative knowledge curation, covers all aspects of biological knowledge and keeps evolving with novel knowledge.
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spelling pubmed-39649902014-03-25 RiceWiki: a wiki-based database for community curation of rice genes Zhang, Zhang Sang, Jian Ma, Lina Wu, Gang Wu, Hao Huang, Dawei Zou, Dong Liu, Siqi Li, Ang Hao, Lili Tian, Ming Xu, Chao Wang, Xumin Wu, Jiayan Xiao, Jingfa Dai, Lin Chen, Ling-Ling Hu, Songnian Yu, Jun Nucleic Acids Res VII. Plant databases Rice is the most important staple food for a large part of the world’s human population and also a key model organism for biological studies of crops as well as other related plants. Here we present RiceWiki (http://ricewiki.big.ac.cn), a wiki-based, publicly editable and open-content platform for community curation of rice genes. Most existing related biological databases are based on expert curation; with the exponentially exploding volume of rice knowledge and other relevant data, however, expert curation becomes increasingly laborious and time-consuming to keep knowledge up-to-date, accurate and comprehensive, struggling with the flood of data and requiring a large number of people getting involved in rice knowledge curation. Unlike extant relevant databases, RiceWiki features harnessing collective intelligence in community curation of rice genes, quantifying users' contributions in each curated gene and providing explicit authorship for each contributor in any given gene, with the aim to exploit the full potential of the scientific community for rice knowledge curation. Based on community curation, RiceWiki bears the potential to make it possible to build a rice encyclopedia by and for the scientific community that harnesses community intelligence for collaborative knowledge curation, covers all aspects of biological knowledge and keeps evolving with novel knowledge. Oxford University Press 2014-01-01 2013-10-16 /pmc/articles/PMC3964990/ /pubmed/24136999 http://dx.doi.org/10.1093/nar/gkt926 Text en © The Author(s) 2013. Published by Oxford University Press. http://creativecommons.org/licenses/by-nc/3.0/ This is an Open Access article distributed under the terms of the Creative Commons Attribution Non-Commercial License (http://creativecommons.org/licenses/by-nc/3.0/), which permits non-commercial reuse, distribution, and reproduction in any medium, provided the original work is properly cited. For commercial re-use, please contact journals.permissions@oup.com
spellingShingle VII. Plant databases
Zhang, Zhang
Sang, Jian
Ma, Lina
Wu, Gang
Wu, Hao
Huang, Dawei
Zou, Dong
Liu, Siqi
Li, Ang
Hao, Lili
Tian, Ming
Xu, Chao
Wang, Xumin
Wu, Jiayan
Xiao, Jingfa
Dai, Lin
Chen, Ling-Ling
Hu, Songnian
Yu, Jun
RiceWiki: a wiki-based database for community curation of rice genes
title RiceWiki: a wiki-based database for community curation of rice genes
title_full RiceWiki: a wiki-based database for community curation of rice genes
title_fullStr RiceWiki: a wiki-based database for community curation of rice genes
title_full_unstemmed RiceWiki: a wiki-based database for community curation of rice genes
title_short RiceWiki: a wiki-based database for community curation of rice genes
title_sort ricewiki: a wiki-based database for community curation of rice genes
topic VII. Plant databases
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3964990/
https://www.ncbi.nlm.nih.gov/pubmed/24136999
http://dx.doi.org/10.1093/nar/gkt926
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