Cargando…
RiceWiki: a wiki-based database for community curation of rice genes
Rice is the most important staple food for a large part of the world’s human population and also a key model organism for biological studies of crops as well as other related plants. Here we present RiceWiki (http://ricewiki.big.ac.cn), a wiki-based, publicly editable and open-content platform for c...
Autores principales: | , , , , , , , , , , , , , , , , , , |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Oxford University Press
2014
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3964990/ https://www.ncbi.nlm.nih.gov/pubmed/24136999 http://dx.doi.org/10.1093/nar/gkt926 |
_version_ | 1782479274131849216 |
---|---|
author | Zhang, Zhang Sang, Jian Ma, Lina Wu, Gang Wu, Hao Huang, Dawei Zou, Dong Liu, Siqi Li, Ang Hao, Lili Tian, Ming Xu, Chao Wang, Xumin Wu, Jiayan Xiao, Jingfa Dai, Lin Chen, Ling-Ling Hu, Songnian Yu, Jun |
author_facet | Zhang, Zhang Sang, Jian Ma, Lina Wu, Gang Wu, Hao Huang, Dawei Zou, Dong Liu, Siqi Li, Ang Hao, Lili Tian, Ming Xu, Chao Wang, Xumin Wu, Jiayan Xiao, Jingfa Dai, Lin Chen, Ling-Ling Hu, Songnian Yu, Jun |
author_sort | Zhang, Zhang |
collection | PubMed |
description | Rice is the most important staple food for a large part of the world’s human population and also a key model organism for biological studies of crops as well as other related plants. Here we present RiceWiki (http://ricewiki.big.ac.cn), a wiki-based, publicly editable and open-content platform for community curation of rice genes. Most existing related biological databases are based on expert curation; with the exponentially exploding volume of rice knowledge and other relevant data, however, expert curation becomes increasingly laborious and time-consuming to keep knowledge up-to-date, accurate and comprehensive, struggling with the flood of data and requiring a large number of people getting involved in rice knowledge curation. Unlike extant relevant databases, RiceWiki features harnessing collective intelligence in community curation of rice genes, quantifying users' contributions in each curated gene and providing explicit authorship for each contributor in any given gene, with the aim to exploit the full potential of the scientific community for rice knowledge curation. Based on community curation, RiceWiki bears the potential to make it possible to build a rice encyclopedia by and for the scientific community that harnesses community intelligence for collaborative knowledge curation, covers all aspects of biological knowledge and keeps evolving with novel knowledge. |
format | Online Article Text |
id | pubmed-3964990 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2014 |
publisher | Oxford University Press |
record_format | MEDLINE/PubMed |
spelling | pubmed-39649902014-03-25 RiceWiki: a wiki-based database for community curation of rice genes Zhang, Zhang Sang, Jian Ma, Lina Wu, Gang Wu, Hao Huang, Dawei Zou, Dong Liu, Siqi Li, Ang Hao, Lili Tian, Ming Xu, Chao Wang, Xumin Wu, Jiayan Xiao, Jingfa Dai, Lin Chen, Ling-Ling Hu, Songnian Yu, Jun Nucleic Acids Res VII. Plant databases Rice is the most important staple food for a large part of the world’s human population and also a key model organism for biological studies of crops as well as other related plants. Here we present RiceWiki (http://ricewiki.big.ac.cn), a wiki-based, publicly editable and open-content platform for community curation of rice genes. Most existing related biological databases are based on expert curation; with the exponentially exploding volume of rice knowledge and other relevant data, however, expert curation becomes increasingly laborious and time-consuming to keep knowledge up-to-date, accurate and comprehensive, struggling with the flood of data and requiring a large number of people getting involved in rice knowledge curation. Unlike extant relevant databases, RiceWiki features harnessing collective intelligence in community curation of rice genes, quantifying users' contributions in each curated gene and providing explicit authorship for each contributor in any given gene, with the aim to exploit the full potential of the scientific community for rice knowledge curation. Based on community curation, RiceWiki bears the potential to make it possible to build a rice encyclopedia by and for the scientific community that harnesses community intelligence for collaborative knowledge curation, covers all aspects of biological knowledge and keeps evolving with novel knowledge. Oxford University Press 2014-01-01 2013-10-16 /pmc/articles/PMC3964990/ /pubmed/24136999 http://dx.doi.org/10.1093/nar/gkt926 Text en © The Author(s) 2013. Published by Oxford University Press. http://creativecommons.org/licenses/by-nc/3.0/ This is an Open Access article distributed under the terms of the Creative Commons Attribution Non-Commercial License (http://creativecommons.org/licenses/by-nc/3.0/), which permits non-commercial reuse, distribution, and reproduction in any medium, provided the original work is properly cited. For commercial re-use, please contact journals.permissions@oup.com |
spellingShingle | VII. Plant databases Zhang, Zhang Sang, Jian Ma, Lina Wu, Gang Wu, Hao Huang, Dawei Zou, Dong Liu, Siqi Li, Ang Hao, Lili Tian, Ming Xu, Chao Wang, Xumin Wu, Jiayan Xiao, Jingfa Dai, Lin Chen, Ling-Ling Hu, Songnian Yu, Jun RiceWiki: a wiki-based database for community curation of rice genes |
title | RiceWiki: a wiki-based database for community curation of rice genes |
title_full | RiceWiki: a wiki-based database for community curation of rice genes |
title_fullStr | RiceWiki: a wiki-based database for community curation of rice genes |
title_full_unstemmed | RiceWiki: a wiki-based database for community curation of rice genes |
title_short | RiceWiki: a wiki-based database for community curation of rice genes |
title_sort | ricewiki: a wiki-based database for community curation of rice genes |
topic | VII. Plant databases |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3964990/ https://www.ncbi.nlm.nih.gov/pubmed/24136999 http://dx.doi.org/10.1093/nar/gkt926 |
work_keys_str_mv | AT zhangzhang ricewikiawikibaseddatabaseforcommunitycurationofricegenes AT sangjian ricewikiawikibaseddatabaseforcommunitycurationofricegenes AT malina ricewikiawikibaseddatabaseforcommunitycurationofricegenes AT wugang ricewikiawikibaseddatabaseforcommunitycurationofricegenes AT wuhao ricewikiawikibaseddatabaseforcommunitycurationofricegenes AT huangdawei ricewikiawikibaseddatabaseforcommunitycurationofricegenes AT zoudong ricewikiawikibaseddatabaseforcommunitycurationofricegenes AT liusiqi ricewikiawikibaseddatabaseforcommunitycurationofricegenes AT liang ricewikiawikibaseddatabaseforcommunitycurationofricegenes AT haolili ricewikiawikibaseddatabaseforcommunitycurationofricegenes AT tianming ricewikiawikibaseddatabaseforcommunitycurationofricegenes AT xuchao ricewikiawikibaseddatabaseforcommunitycurationofricegenes AT wangxumin ricewikiawikibaseddatabaseforcommunitycurationofricegenes AT wujiayan ricewikiawikibaseddatabaseforcommunitycurationofricegenes AT xiaojingfa ricewikiawikibaseddatabaseforcommunitycurationofricegenes AT dailin ricewikiawikibaseddatabaseforcommunitycurationofricegenes AT chenlingling ricewikiawikibaseddatabaseforcommunitycurationofricegenes AT husongnian ricewikiawikibaseddatabaseforcommunitycurationofricegenes AT yujun ricewikiawikibaseddatabaseforcommunitycurationofricegenes |