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BacMet: antibacterial biocide and metal resistance genes database
Antibiotic resistance has become a major human health concern due to widespread use, misuse and overuse of antibiotics. In addition to antibiotics, antibacterial biocides and metals can contribute to the development and maintenance of antibiotic resistance in bacterial communities through co-selecti...
Autores principales: | , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Oxford University Press
2014
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3965030/ https://www.ncbi.nlm.nih.gov/pubmed/24304895 http://dx.doi.org/10.1093/nar/gkt1252 |
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author | Pal, Chandan Bengtsson-Palme, Johan Rensing, Christopher Kristiansson, Erik Larsson, D. G. Joakim |
author_facet | Pal, Chandan Bengtsson-Palme, Johan Rensing, Christopher Kristiansson, Erik Larsson, D. G. Joakim |
author_sort | Pal, Chandan |
collection | PubMed |
description | Antibiotic resistance has become a major human health concern due to widespread use, misuse and overuse of antibiotics. In addition to antibiotics, antibacterial biocides and metals can contribute to the development and maintenance of antibiotic resistance in bacterial communities through co-selection. Information on metal and biocide resistance genes, including their sequences and molecular functions, is, however, scattered. Here, we introduce BacMet (http://bacmet.biomedicine.gu.se)—a manually curated database of antibacterial biocide- and metal-resistance genes based on an in-depth review of the scientific literature. The BacMet database contains 470 experimentally verified resistance genes. In addition, the database also contains 25 477 potential resistance genes collected from public sequence repositories. All resistance genes in the BacMet database have been organized according to their molecular function and induced resistance phenotype. |
format | Online Article Text |
id | pubmed-3965030 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2014 |
publisher | Oxford University Press |
record_format | MEDLINE/PubMed |
spelling | pubmed-39650302014-03-25 BacMet: antibacterial biocide and metal resistance genes database Pal, Chandan Bengtsson-Palme, Johan Rensing, Christopher Kristiansson, Erik Larsson, D. G. Joakim Nucleic Acids Res IV. Viruses, bacteria, protozoa and fungi Antibiotic resistance has become a major human health concern due to widespread use, misuse and overuse of antibiotics. In addition to antibiotics, antibacterial biocides and metals can contribute to the development and maintenance of antibiotic resistance in bacterial communities through co-selection. Information on metal and biocide resistance genes, including their sequences and molecular functions, is, however, scattered. Here, we introduce BacMet (http://bacmet.biomedicine.gu.se)—a manually curated database of antibacterial biocide- and metal-resistance genes based on an in-depth review of the scientific literature. The BacMet database contains 470 experimentally verified resistance genes. In addition, the database also contains 25 477 potential resistance genes collected from public sequence repositories. All resistance genes in the BacMet database have been organized according to their molecular function and induced resistance phenotype. Oxford University Press 2014-01-01 2013-12-03 /pmc/articles/PMC3965030/ /pubmed/24304895 http://dx.doi.org/10.1093/nar/gkt1252 Text en © The Author(s) 2013. Published by Oxford University Press. http://creativecommons.org/licenses/by/3.0/ This is an Open Access article distributed under the terms of the Creative Commons Attribution Non-Commercial License (http://creativecommons.org/licenses/by/3.0/), which permits non-commercial reuse, distribution, and reproduction in any medium, provided the original work is properly cited. For commercial re-use, please contact journals.permissions@oup.com |
spellingShingle | IV. Viruses, bacteria, protozoa and fungi Pal, Chandan Bengtsson-Palme, Johan Rensing, Christopher Kristiansson, Erik Larsson, D. G. Joakim BacMet: antibacterial biocide and metal resistance genes database |
title | BacMet: antibacterial biocide and metal resistance genes database |
title_full | BacMet: antibacterial biocide and metal resistance genes database |
title_fullStr | BacMet: antibacterial biocide and metal resistance genes database |
title_full_unstemmed | BacMet: antibacterial biocide and metal resistance genes database |
title_short | BacMet: antibacterial biocide and metal resistance genes database |
title_sort | bacmet: antibacterial biocide and metal resistance genes database |
topic | IV. Viruses, bacteria, protozoa and fungi |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3965030/ https://www.ncbi.nlm.nih.gov/pubmed/24304895 http://dx.doi.org/10.1093/nar/gkt1252 |
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