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BacMet: antibacterial biocide and metal resistance genes database

Antibiotic resistance has become a major human health concern due to widespread use, misuse and overuse of antibiotics. In addition to antibiotics, antibacterial biocides and metals can contribute to the development and maintenance of antibiotic resistance in bacterial communities through co-selecti...

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Autores principales: Pal, Chandan, Bengtsson-Palme, Johan, Rensing, Christopher, Kristiansson, Erik, Larsson, D. G. Joakim
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Oxford University Press 2014
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3965030/
https://www.ncbi.nlm.nih.gov/pubmed/24304895
http://dx.doi.org/10.1093/nar/gkt1252
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author Pal, Chandan
Bengtsson-Palme, Johan
Rensing, Christopher
Kristiansson, Erik
Larsson, D. G. Joakim
author_facet Pal, Chandan
Bengtsson-Palme, Johan
Rensing, Christopher
Kristiansson, Erik
Larsson, D. G. Joakim
author_sort Pal, Chandan
collection PubMed
description Antibiotic resistance has become a major human health concern due to widespread use, misuse and overuse of antibiotics. In addition to antibiotics, antibacterial biocides and metals can contribute to the development and maintenance of antibiotic resistance in bacterial communities through co-selection. Information on metal and biocide resistance genes, including their sequences and molecular functions, is, however, scattered. Here, we introduce BacMet (http://bacmet.biomedicine.gu.se)—a manually curated database of antibacterial biocide- and metal-resistance genes based on an in-depth review of the scientific literature. The BacMet database contains 470 experimentally verified resistance genes. In addition, the database also contains 25 477 potential resistance genes collected from public sequence repositories. All resistance genes in the BacMet database have been organized according to their molecular function and induced resistance phenotype.
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spelling pubmed-39650302014-03-25 BacMet: antibacterial biocide and metal resistance genes database Pal, Chandan Bengtsson-Palme, Johan Rensing, Christopher Kristiansson, Erik Larsson, D. G. Joakim Nucleic Acids Res IV. Viruses, bacteria, protozoa and fungi Antibiotic resistance has become a major human health concern due to widespread use, misuse and overuse of antibiotics. In addition to antibiotics, antibacterial biocides and metals can contribute to the development and maintenance of antibiotic resistance in bacterial communities through co-selection. Information on metal and biocide resistance genes, including their sequences and molecular functions, is, however, scattered. Here, we introduce BacMet (http://bacmet.biomedicine.gu.se)—a manually curated database of antibacterial biocide- and metal-resistance genes based on an in-depth review of the scientific literature. The BacMet database contains 470 experimentally verified resistance genes. In addition, the database also contains 25 477 potential resistance genes collected from public sequence repositories. All resistance genes in the BacMet database have been organized according to their molecular function and induced resistance phenotype. Oxford University Press 2014-01-01 2013-12-03 /pmc/articles/PMC3965030/ /pubmed/24304895 http://dx.doi.org/10.1093/nar/gkt1252 Text en © The Author(s) 2013. Published by Oxford University Press. http://creativecommons.org/licenses/by/3.0/ This is an Open Access article distributed under the terms of the Creative Commons Attribution Non-Commercial License (http://creativecommons.org/licenses/by/3.0/), which permits non-commercial reuse, distribution, and reproduction in any medium, provided the original work is properly cited. For commercial re-use, please contact journals.permissions@oup.com
spellingShingle IV. Viruses, bacteria, protozoa and fungi
Pal, Chandan
Bengtsson-Palme, Johan
Rensing, Christopher
Kristiansson, Erik
Larsson, D. G. Joakim
BacMet: antibacterial biocide and metal resistance genes database
title BacMet: antibacterial biocide and metal resistance genes database
title_full BacMet: antibacterial biocide and metal resistance genes database
title_fullStr BacMet: antibacterial biocide and metal resistance genes database
title_full_unstemmed BacMet: antibacterial biocide and metal resistance genes database
title_short BacMet: antibacterial biocide and metal resistance genes database
title_sort bacmet: antibacterial biocide and metal resistance genes database
topic IV. Viruses, bacteria, protozoa and fungi
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3965030/
https://www.ncbi.nlm.nih.gov/pubmed/24304895
http://dx.doi.org/10.1093/nar/gkt1252
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