PDBsum additions

PDBsum, http://www.ebi.ac.uk/pdbsum, is a website providing numerous pictorial analyses of each entry in the Protein Data Bank. It portrays the structural features of all proteins, DNA and ligands in the entry, as well as depicting the interactions between them. The latest features, described here,...

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Detalles Bibliográficos
Autores principales: de Beer, Tjaart A. P., Berka, Karel, Thornton, Janet M., Laskowski, Roman A.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Oxford University Press 2014
Materias:
II. Protein sequence and structure, motifs and domains
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3965036/
https://www.ncbi.nlm.nih.gov/pubmed/24153109
http://dx.doi.org/10.1093/nar/gkt940
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author de Beer, Tjaart A. P.
Berka, Karel
Thornton, Janet M.
Laskowski, Roman A.
author_facet de Beer, Tjaart A. P.
Berka, Karel
Thornton, Janet M.
Laskowski, Roman A.
author_sort de Beer, Tjaart A. P.
collection PubMed
description PDBsum, http://www.ebi.ac.uk/pdbsum, is a website providing numerous pictorial analyses of each entry in the Protein Data Bank. It portrays the structural features of all proteins, DNA and ligands in the entry, as well as depicting the interactions between them. The latest features, described here, include annotation of human protein sequences with their naturally occurring amino acid variants, dynamic graphs showing the relationships between related protein domain architectures, analyses of ligand binding clusters across different experimental determinations of the same protein, analyses of tunnels in proteins and new search options.
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spelling pubmed-39650362014-03-25 PDBsum additions de Beer, Tjaart A. P. Berka, Karel Thornton, Janet M. Laskowski, Roman A. Nucleic Acids Res II. Protein sequence and structure, motifs and domains PDBsum, http://www.ebi.ac.uk/pdbsum, is a website providing numerous pictorial analyses of each entry in the Protein Data Bank. It portrays the structural features of all proteins, DNA and ligands in the entry, as well as depicting the interactions between them. The latest features, described here, include annotation of human protein sequences with their naturally occurring amino acid variants, dynamic graphs showing the relationships between related protein domain architectures, analyses of ligand binding clusters across different experimental determinations of the same protein, analyses of tunnels in proteins and new search options. Oxford University Press 2014-01-01 2013-10-22 /pmc/articles/PMC3965036/ /pubmed/24153109 http://dx.doi.org/10.1093/nar/gkt940 Text en © The Author(s) 2013. Published by Oxford University Press. http://creativecommons.org/licenses/by/3.0/ This is an Open Access article distributed under the terms of the Creative Commons Attribution Non-Commercial License (http://creativecommons.org/licenses/by/3.0/), which permits non-commercial reuse, distribution, and reproduction in any medium, provided the original work is properly cited. For commercial re-use, please contact journals.permissions@oup.com
spellingShingle II. Protein sequence and structure, motifs and domains
de Beer, Tjaart A. P.
Berka, Karel
Thornton, Janet M.
Laskowski, Roman A.
PDBsum additions
title PDBsum additions
title_full PDBsum additions
title_fullStr PDBsum additions
title_full_unstemmed PDBsum additions
title_short PDBsum additions
title_sort pdbsum additions
topic II. Protein sequence and structure, motifs and domains
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3965036/
https://www.ncbi.nlm.nih.gov/pubmed/24153109
http://dx.doi.org/10.1093/nar/gkt940
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AT berkakarel pdbsumadditions
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AT laskowskiromana pdbsumadditions

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