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The MIntAct project—IntAct as a common curation platform for 11 molecular interaction databases
IntAct (freely available at http://www.ebi.ac.uk/intact) is an open-source, open data molecular interaction database populated by data either curated from the literature or from direct data depositions. IntAct has developed a sophisticated web-based curation tool, capable of supporting both IMEx- an...
Autores principales: | , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
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Oxford University Press
2014
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3965093/ https://www.ncbi.nlm.nih.gov/pubmed/24234451 http://dx.doi.org/10.1093/nar/gkt1115 |
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author | Orchard, Sandra Ammari, Mais Aranda, Bruno Breuza, Lionel Briganti, Leonardo Broackes-Carter, Fiona Campbell, Nancy H. Chavali, Gayatri Chen, Carol del-Toro, Noemi Duesbury, Margaret Dumousseau, Marine Galeota, Eugenia Hinz, Ursula Iannuccelli, Marta Jagannathan, Sruthi Jimenez, Rafael Khadake, Jyoti Lagreid, Astrid Licata, Luana Lovering, Ruth C. Meldal, Birgit Melidoni, Anna N. Milagros, Mila Peluso, Daniele Perfetto, Livia Porras, Pablo Raghunath, Arathi Ricard-Blum, Sylvie Roechert, Bernd Stutz, Andre Tognolli, Michael van Roey, Kim Cesareni, Gianni Hermjakob, Henning |
author_facet | Orchard, Sandra Ammari, Mais Aranda, Bruno Breuza, Lionel Briganti, Leonardo Broackes-Carter, Fiona Campbell, Nancy H. Chavali, Gayatri Chen, Carol del-Toro, Noemi Duesbury, Margaret Dumousseau, Marine Galeota, Eugenia Hinz, Ursula Iannuccelli, Marta Jagannathan, Sruthi Jimenez, Rafael Khadake, Jyoti Lagreid, Astrid Licata, Luana Lovering, Ruth C. Meldal, Birgit Melidoni, Anna N. Milagros, Mila Peluso, Daniele Perfetto, Livia Porras, Pablo Raghunath, Arathi Ricard-Blum, Sylvie Roechert, Bernd Stutz, Andre Tognolli, Michael van Roey, Kim Cesareni, Gianni Hermjakob, Henning |
author_sort | Orchard, Sandra |
collection | PubMed |
description | IntAct (freely available at http://www.ebi.ac.uk/intact) is an open-source, open data molecular interaction database populated by data either curated from the literature or from direct data depositions. IntAct has developed a sophisticated web-based curation tool, capable of supporting both IMEx- and MIMIx-level curation. This tool is now utilized by multiple additional curation teams, all of whom annotate data directly into the IntAct database. Members of the IntAct team supply appropriate levels of training, perform quality control on entries and take responsibility for long-term data maintenance. Recently, the MINT and IntAct databases decided to merge their separate efforts to make optimal use of limited developer resources and maximize the curation output. All data manually curated by the MINT curators have been moved into the IntAct database at EMBL-EBI and are merged with the existing IntAct dataset. Both IntAct and MINT are active contributors to the IMEx consortium (http://www.imexconsortium.org). |
format | Online Article Text |
id | pubmed-3965093 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2014 |
publisher | Oxford University Press |
record_format | MEDLINE/PubMed |
spelling | pubmed-39650932014-03-25 The MIntAct project—IntAct as a common curation platform for 11 molecular interaction databases Orchard, Sandra Ammari, Mais Aranda, Bruno Breuza, Lionel Briganti, Leonardo Broackes-Carter, Fiona Campbell, Nancy H. Chavali, Gayatri Chen, Carol del-Toro, Noemi Duesbury, Margaret Dumousseau, Marine Galeota, Eugenia Hinz, Ursula Iannuccelli, Marta Jagannathan, Sruthi Jimenez, Rafael Khadake, Jyoti Lagreid, Astrid Licata, Luana Lovering, Ruth C. Meldal, Birgit Melidoni, Anna N. Milagros, Mila Peluso, Daniele Perfetto, Livia Porras, Pablo Raghunath, Arathi Ricard-Blum, Sylvie Roechert, Bernd Stutz, Andre Tognolli, Michael van Roey, Kim Cesareni, Gianni Hermjakob, Henning Nucleic Acids Res II. Protein sequence and structure, motifs and domains IntAct (freely available at http://www.ebi.ac.uk/intact) is an open-source, open data molecular interaction database populated by data either curated from the literature or from direct data depositions. IntAct has developed a sophisticated web-based curation tool, capable of supporting both IMEx- and MIMIx-level curation. This tool is now utilized by multiple additional curation teams, all of whom annotate data directly into the IntAct database. Members of the IntAct team supply appropriate levels of training, perform quality control on entries and take responsibility for long-term data maintenance. Recently, the MINT and IntAct databases decided to merge their separate efforts to make optimal use of limited developer resources and maximize the curation output. All data manually curated by the MINT curators have been moved into the IntAct database at EMBL-EBI and are merged with the existing IntAct dataset. Both IntAct and MINT are active contributors to the IMEx consortium (http://www.imexconsortium.org). Oxford University Press 2014-01-01 2013-11-13 /pmc/articles/PMC3965093/ /pubmed/24234451 http://dx.doi.org/10.1093/nar/gkt1115 Text en © The Author(s) 2013. Published by Oxford University Press. http://creativecommons.org/licenses/by/3.0/ This is an Open Access article distributed under the terms of the Creative Commons Attribution Non-Commercial License (http://creativecommons.org/licenses/by/3.0/), which permits non-commercial reuse, distribution, and reproduction in any medium, provided the original work is properly cited. For commercial re-use, please contact journals.permissions@oup.com |
spellingShingle | II. Protein sequence and structure, motifs and domains Orchard, Sandra Ammari, Mais Aranda, Bruno Breuza, Lionel Briganti, Leonardo Broackes-Carter, Fiona Campbell, Nancy H. Chavali, Gayatri Chen, Carol del-Toro, Noemi Duesbury, Margaret Dumousseau, Marine Galeota, Eugenia Hinz, Ursula Iannuccelli, Marta Jagannathan, Sruthi Jimenez, Rafael Khadake, Jyoti Lagreid, Astrid Licata, Luana Lovering, Ruth C. Meldal, Birgit Melidoni, Anna N. Milagros, Mila Peluso, Daniele Perfetto, Livia Porras, Pablo Raghunath, Arathi Ricard-Blum, Sylvie Roechert, Bernd Stutz, Andre Tognolli, Michael van Roey, Kim Cesareni, Gianni Hermjakob, Henning The MIntAct project—IntAct as a common curation platform for 11 molecular interaction databases |
title | The MIntAct project—IntAct as a common curation platform for 11 molecular interaction databases |
title_full | The MIntAct project—IntAct as a common curation platform for 11 molecular interaction databases |
title_fullStr | The MIntAct project—IntAct as a common curation platform for 11 molecular interaction databases |
title_full_unstemmed | The MIntAct project—IntAct as a common curation platform for 11 molecular interaction databases |
title_short | The MIntAct project—IntAct as a common curation platform for 11 molecular interaction databases |
title_sort | mintact project—intact as a common curation platform for 11 molecular interaction databases |
topic | II. Protein sequence and structure, motifs and domains |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3965093/ https://www.ncbi.nlm.nih.gov/pubmed/24234451 http://dx.doi.org/10.1093/nar/gkt1115 |
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