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miRNEST 2.0: a database of plant and animal microRNAs
Ever growing interest in microRNAs has immensely populated the number of resources and research papers devoted to the field and, as a result, it becomes more and more demanding to find miRNA data of interest. To mitigate this problem, we created miRNEST database (http://mirnest.amu.edu.pl), an integ...
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Oxford University Press
2014
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3965105/ https://www.ncbi.nlm.nih.gov/pubmed/24243848 http://dx.doi.org/10.1093/nar/gkt1156 |
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author | Szcześniak, Michał W. Makałowska, Izabela |
author_facet | Szcześniak, Michał W. Makałowska, Izabela |
author_sort | Szcześniak, Michał W. |
collection | PubMed |
description | Ever growing interest in microRNAs has immensely populated the number of resources and research papers devoted to the field and, as a result, it becomes more and more demanding to find miRNA data of interest. To mitigate this problem, we created miRNEST database (http://mirnest.amu.edu.pl), an integrative microRNAs resource. In its updated version, named miRNEST 2.0, the database is complemented with our extensive miRNA predictions from deep sequencing libraries, data from plant degradome analyses, results of pre-miRNA classification with HuntMi and miRNA splice sites information. We also added download and upload options and improved the user interface to make it easier to browse through miRNA records. |
format | Online Article Text |
id | pubmed-3965105 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2014 |
publisher | Oxford University Press |
record_format | MEDLINE/PubMed |
spelling | pubmed-39651052014-03-25 miRNEST 2.0: a database of plant and animal microRNAs Szcześniak, Michał W. Makałowska, Izabela Nucleic Acids Res I. Nucleic acid sequence, structure and regulation Ever growing interest in microRNAs has immensely populated the number of resources and research papers devoted to the field and, as a result, it becomes more and more demanding to find miRNA data of interest. To mitigate this problem, we created miRNEST database (http://mirnest.amu.edu.pl), an integrative microRNAs resource. In its updated version, named miRNEST 2.0, the database is complemented with our extensive miRNA predictions from deep sequencing libraries, data from plant degradome analyses, results of pre-miRNA classification with HuntMi and miRNA splice sites information. We also added download and upload options and improved the user interface to make it easier to browse through miRNA records. Oxford University Press 2014-01-01 2013-11-15 /pmc/articles/PMC3965105/ /pubmed/24243848 http://dx.doi.org/10.1093/nar/gkt1156 Text en © The Author(s) 2013. Published by Oxford University Press. http://creativecommons.org/licenses/by-nc/3.0/ This is an Open Access article distributed under the terms of the Creative Commons Attribution Non-Commercial License (http://creativecommons.org/licenses/by-nc/3.0/), which permits non-commercial reuse, distribution, and reproduction in any medium, provided the original work is properly cited. For commercial re-use, please contact journals.permissions@oup.com |
spellingShingle | I. Nucleic acid sequence, structure and regulation Szcześniak, Michał W. Makałowska, Izabela miRNEST 2.0: a database of plant and animal microRNAs |
title | miRNEST 2.0: a database of plant and animal microRNAs |
title_full | miRNEST 2.0: a database of plant and animal microRNAs |
title_fullStr | miRNEST 2.0: a database of plant and animal microRNAs |
title_full_unstemmed | miRNEST 2.0: a database of plant and animal microRNAs |
title_short | miRNEST 2.0: a database of plant and animal microRNAs |
title_sort | mirnest 2.0: a database of plant and animal micrornas |
topic | I. Nucleic acid sequence, structure and regulation |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3965105/ https://www.ncbi.nlm.nih.gov/pubmed/24243848 http://dx.doi.org/10.1093/nar/gkt1156 |
work_keys_str_mv | AT szczesniakmichałw mirnest20adatabaseofplantandanimalmicrornas AT makałowskaizabela mirnest20adatabaseofplantandanimalmicrornas |