Cargando…

Evaluation of Customised Lineage-Specific Sets of MIRU-VNTR Loci for Genotyping Mycobacterium tuberculosis Complex Isolates in Ghana

BACKGROUND: Different combinations of variable number of tandem repeat (VNTR) loci have been proposed for genotyping Mycobacterium tuberculosis complex (MTBC). Existing VNTR schemes show different discriminatory capacity among the six human MTBC lineages. Here, we evaluated the discriminatory power...

Descripción completa

Detalles Bibliográficos
Autores principales:	Asante-Poku, Adwoa, Nyaho, Michael Selasi, Borrell, Sonia, Comas, Iñaki, Gagneux, Sebastien, Yeboah-Manu, Dorothy
Formato:	Online Artículo Texto
Lenguaje:	English
Publicado:	Public Library of Science 2014
Materias:	Research Article
Acceso en línea:	https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3965448/ https://www.ncbi.nlm.nih.gov/pubmed/24667333 http://dx.doi.org/10.1371/journal.pone.0092675

Ejemplares similares

Evaluation of spoligotyping, SNPs and customised MIRU-VNTR combination for genotyping Mycobacterium tuberculosis clinical isolates in Madagascar
por: Rasoahanitralisoa, Rondroarivelo, et al.
Publicado: (2017)

Classifying recurrent Mycobacterium tuberculosis cases in Georgia using MIRU-VNTR typing
por: Maghradze, Nino, et al.
Publicado: (2019)

Developing customized stepwise MIRU-VNTR typing for tuberculosis surveillance in Georgia
por: Maghradze, Nino, et al.
Publicado: (2022)

Synchronous Comparison of Mycobacterium tuberculosis Epidemiology Strains by “MIRU-VNTR” and “MIRU-VNTR and Spoligotyping” Technique
por: Jafarian, Mehdi, et al.
Publicado: (2010)

Mycobacterium africanum Is Associated with Patient Ethnicity in Ghana
por: Asante-Poku, Adwoa, et al.
Publicado: (2015)

MIRU-profiler: a rapid tool for determination of 24-loci MIRU-VNTR profiles from assembled genomes of Mycobacterium tuberculosis
por: Rajwani, Rahim, et al.
Publicado: (2018)

Molecular epidemiology of Mycobacterium africanum in Ghana
por: Asante-Poku, Adwoa, et al.
Publicado: (2016)

Genotypic Diversity and Drug Susceptibility Patterns among M. tuberculosis Complex Isolates from South-Western Ghana
por: Yeboah-Manu, Dorothy, et al.
Publicado: (2011)

Genetic evaluation of Mycobacterium bovis isolates with MIRU-VNTR and spoligotyping
por: TUZCU, Nevin, et al.
Publicado: (2020)

Evaluation of the new advanced 15-loci MIRU-VNTR genotyping tool in Mycobacterium tuberculosis molecular epidemiology studies
por: Alonso-Rodríguez, Noelia, et al.
Publicado: (2008)

Molecular epidemiology of Mycobacterium tuberculosis complex in the Volta Region of Ghana
por: Ameke, Selassie, et al.
Publicado: (2021)

Two New Rapid SNP-Typing Methods for Classifying Mycobacterium tuberculosis Complex into the Main Phylogenetic Lineages
por: Stucki, David, et al.
Publicado: (2012)

Genotyping of Clinical Mycobacterium tuberculosis Isolates Based on IS6110 and MIRU-VNTR Polymorphisms
por: Żaczek, Anna, et al.
Publicado: (2013)

TB-diabetes co-morbidity in Ghana: The importance of Mycobacterium africanum infection
por: Asante-Poku, Adwoa, et al.
Publicado: (2019)

Spatio-Temporal Distribution of Mycobacterium tuberculosis Complex Strains in Ghana
por: Yeboah-Manu, Dorothy, et al.
Publicado: (2016)

Caracterización genotópica (MIRU-VNTR loci 24) deaislados clínicos de tuberculosis presentes en Veracruz, México: /
por: Almaraz Velasco, Raquel
Publicado: (2016)

Determining the Risk of Intra-Community Transmission of Tuberculosis in the Northwest of Iran Through 15 Loci Miru-Vntr Typing
por: Afaghi-Gharamaleki, Ali, et al.
Publicado: (2017)

Comparative genomics of Mycobacterium africanum Lineage 5 and Lineage 6 from Ghana suggests distinct ecological niches
por: Otchere, Isaac Darko, et al.
Publicado: (2018)

Reduced transmission of Mycobacterium africanum compared to Mycobacterium tuberculosis in urban West Africa
por: Asare, Prince, et al.
Publicado: (2018)

Proposal of a Screening MIRU-VNTR Panel for the Preliminary Genotyping of Mycobacterium bovis in Mexico
por: Bolado-Martínez, Enrique, et al.
Publicado: (2015)

Genomic Variability of Mycobacterium tuberculosis Strains of the Euro-American Lineage Based on Large Sequence Deletions and 15-Locus MIRU-VNTR Polymorphism
por: Rindi, Laura, et al.
Publicado: (2014)

Whole Genome Sequencing and Spatial Analysis Identifies Recent Tuberculosis Transmission Hotspots in Ghana
por: Asare, Prince, et al.
Publicado: (2020)

Evaluation of MIRU-VNTR for typing of Mycobacterium bovis isolated from Sika deer in Northeast China
por: Yang, Li, et al.
Publicado: (2015)

Role of MIRU-VNTR and spoligotyping in assessing the genetic diversity of Mycobacterium tuberculosis in Henan Province, China
por: Shi, Jie, et al.
Publicado: (2018)

A quantitative and efficient approach to select MIRU–VNTR loci based on accumulation of the percentage differences of strains for discriminating divergent Mycobacterium tuberculosis sublineages
por: Pan, Xin-Ling, et al.
Publicado: (2017)

Correction: Genomic Variability of Mycobacterium tuberculosis Strains of the Euro-American Lineage Based on Large Sequence Deletions and 15-Locus MIRU-VNTR Polymorphism
Publicado: (2014)

Laboratory confirmation of Buruli ulcer cases in Ghana, 2008-2016
por: Yeboah-Manu, Dorothy, et al.
Publicado: (2018)

Detection of multiple strains of Mycobacterium tuberculosis using MIRU-VNTR in patients with pulmonary tuberculosis in Kampala, Uganda
por: Dickman, Katherine R, et al.
Publicado: (2010)

Comparison between RFLP and MIRU-VNTR Genotyping of Mycobacterium tuberculosis Strains Isolated in Stockholm 2009 to 2011
por: Jonsson, Jerker, et al.
Publicado: (2014)

MIRU-VNTR Genotyping of Mycobacterium tuberculosis Strains Using QIAxcel Technology: A Multicentre Evaluation Study
por: Nikolayevskyy, Vladyslav, et al.
Publicado: (2016)

Accuracy of the QIAxcel Automated System for MIRU-VNTR Genotyping of Mycobacterium tuberculosis in Two Limited Resource Settings
por: Tafaj, Silva, et al.
Publicado: (2020)

Rapid clonal analysis of recurrent tuberculosis by direct MIRU-VNTR typing on stored isolates
por: Martín, Ana, et al.
Publicado: (2007)

Compilation of 10 Years of MIRU-VNTR Data: Canadian National Tuberculosis Laboratory's Experience
por: Sharma, Meenu K., et al.
Publicado: (2022)

Extensive Homoplasy but No Evidence of Convergent Evolution of Repeat Numbers at MIRU Loci in Modern Mycobacterium tuberculosis Lineages
por: Outhred, Alexander C., et al.
Publicado: (2020)

Spatiotemporal Co-existence of Two Mycobacterium ulcerans Clonal Complexes in the Offin River Valley of Ghana
por: Lamelas, Araceli, et al.
Publicado: (2016)

Genotyping of Mycobacterium tuberculosis Isolates from Hormozgan Province of Iran Based on 15-Locus MIRU-VNTR and Spoligotyping
por: Zamani, Samin, et al.
Publicado: (2016)

Comparative study of RFLP-IS6110 and MIRU-VNTR from Mycobacterium tuberculosis isolated in the state of Minas Gerais, Brazil
por: Augusto, Cláudio José, et al.
Publicado: (2017)

A Prospective Cohort Study on the Prevalent and Recurrent Tuberculosis Isolates Using the MIRU-VNTR Typing
por: Qiu, Beibei, et al.
Publicado: (2021)

Transmission of multidrug-resistant tuberculosis within family households by DTM-PCR and MIRU-VNTR genotyping
por: Chen, Jun, et al.
Publicado: (2022)

Genomic epidemiological analysis identifies high relapse among individuals with recurring tuberculosis and provides evidence of recent household-related transmission of tuberculosis in Ghana
por: Asare, Prince, et al.
Publicado: (2021)

Cannot write session to /tmp/vufind_sessions/sess_qe16naikm3lv4b5g4ep66602e9