Cargando…

Structure modulation of helix 69 from Escherichia coli 23S ribosomal RNA by pseudouridylations

Helix 69 (H69) is a 19-nt stem-loop region from the large subunit ribosomal RNA. Three pseudouridine (Ψ) modifications clustered in H69 are conserved across phylogeny and known to affect ribosome function. To explore the effects of Ψ on the conformations of Escherichia coli H69 in solution, nuclear...

Descripción completa

Detalles Bibliográficos
Autores principales:	Jiang, Jun, Aduri, Raviprasad, Chow, Christine S., SantaLucia, John
Formato:	Online Artículo Texto
Lenguaje:	English
Publicado:	Oxford University Press 2014
Materias:	RNA
Acceso en línea:	https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3973299/ https://www.ncbi.nlm.nih.gov/pubmed/24371282 http://dx.doi.org/10.1093/nar/gkt1329

Ejemplares similares

Binding of aminoglycoside antibiotics to helix 69 of 23S rRNA
por: Scheunemann, Ann E., et al.
Publicado: (2010)

Functional genetic selection of Helix 66 in Escherichia coli 23S rRNA identified the eukaryotic-binding sequence for ribosomal protein L2
por: Kitahara, Kei, et al.
Publicado: (2007)

Molecular determinants of HIV-1 NCp7 chaperone activity in maturation of the HIV-1 dimerization initiation site
por: Aduri, Raviprasad, et al.
Publicado: (2013)

Random pseuoduridylation in vivo reveals critical region of Escherichia coli 23S rRNA for ribosome assembly
por: Leppik, Margus, et al.
Publicado: (2017)

Alterations of ribosomal RNA pseudouridylation in human breast cancer
por: Barozzi, Chiara, et al.
Publicado: (2023)

Role of ribosome assembly in Escherichia coli ribosomal RNA degradation
por: Jain, Chaitanya
Publicado: (2018)

SrmB, a DEAD-box helicase involved in Escherichia coli ribosome assembly, is specifically targeted to 23S rRNA in vivo
por: Trubetskoy, Dmitrii, et al.
Publicado: (2009)

Investigating the entire course of telithromycin binding to Escherichia coli ribosomes
por: Kostopoulou, Ourania N., et al.
Publicado: (2012)

Functional interaction between bases C1049 in domain II and G2751 in domain VI of 23S rRNA in Escherichia coli ribosomes
por: Miyoshi, Tomohiro, et al.
Publicado: (2008)

A model for the study of ligand binding to the ribosomal RNA helix h44
por: Dibrov, Sergey M., et al.
Publicado: (2010)

Incorporation of 5-fluorouracil into U2 snRNA blocks pseudouridylation and pre-mRNA splicing in vivo
por: Zhao, Xinliang, et al.
Publicado: (2007)

The RNA ligase RtcB reverses MazF-induced ribosome heterogeneity in Escherichia coli
por: Temmel, Hannes, et al.
Publicado: (2017)

Fine-tuning of the ribosomal decoding center by conserved methyl-modifications in the Escherichia coli 16S rRNA
por: Kimura, Satoshi, et al.
Publicado: (2010)

Regulation of translation by ribosomal RNA pseudouridylation
por: Zhao, Yu, et al.
Publicado: (2023)

The complete chemical structure of Saccharomyces cerevisiae rRNA: partial pseudouridylation of U2345 in 25S rRNA by snoRNA snR9
por: Taoka, Masato, et al.
Publicado: (2016)

Polynucleotide Phosphorylase Activity May Be Modulated by Metabolites in Escherichia coli
por: Nurmohamed, Salima, et al.
Publicado: (2011)

Roles of the leader-trailer helix and antitermination complex in biogenesis of the 30S ribosomal subunit
por: Warner, Benjamin R, et al.
Publicado: (2023)

Efficient RNA pseudouridylation by eukaryotic H/ACA ribonucleoproteins requires high affinity binding and correct positioning of guide RNA
por: Caton, Evan A, et al.
Publicado: (2018)

Analysis of the function of E. coli 23S rRNA helix-loop 69 by mutagenesis
por: Liiv, Aivar, et al.
Publicado: (2005)

Escherichia coli ribosomal protein L20 binds as a single monomer to its own mRNA bearing two potential binding sites
por: Allemand, F., et al.
Publicado: (2007)

Analysis of ribosome biogenesis factor-modules in yeast cells depleted from pre-ribosomes
por: Merl, Juliane, et al.
Publicado: (2010)

Introns regulate the production of ribosomal proteins by modulating splicing of duplicated ribosomal protein genes
por: Petibon, Cyrielle, et al.
Publicado: (2016)

Critical 23S rRNA interactions for macrolide-dependent ribosome stalling on the ErmCL nascent peptide chain
por: Koch, Miriam, et al.
Publicado: (2017)

Thermodynamic contributions of single internal rA·dA, rC·dC, rG·dG and rU·dT mismatches in RNA/DNA duplexes
por: Watkins, Norman E., et al.
Publicado: (2011)

Further insights into the tRNA modification process controlled by proteins MnmE and GidA of Escherichia coli
por: Yim, Lucía, et al.
Publicado: (2006)

Dynamic 23S rRNA modification ho(5)C2501 benefits Escherichia coli under oxidative stress
por: Fasnacht, Michel, et al.
Publicado: (2021)

The ribosome biogenesis factor yUtp23/hUTP23 coordinates key interactions in the yeast and human pre-40S particle and hUTP23 contains an essential PIN domain
por: Wells, Graeme R., et al.
Publicado: (2017)

Polyadenylation of a functional mRNA controls gene expression in Escherichia coli
por: Joanny, Géraldine, et al.
Publicado: (2007)

The CRISPR RNA-guided surveillance complex in Escherichia coli accommodates extended RNA spacers
por: Luo, Michelle L., et al.
Publicado: (2016)

Antisense-induced ribosomal frameshifting
por: Henderson, Clark M., et al.
Publicado: (2006)

Turning Uridines around: Role of rRNA Pseudouridylation in Ribosome Biogenesis and Ribosomal Function
por: Penzo, Marianna, et al.
Publicado: (2018)

Antibiotic stress-induced modulation of the endoribonucleolytic activity of RNase III and RNase G confers resistance to aminoglycoside antibiotics in Escherichia coli
por: Song, Wooseok, et al.
Publicado: (2014)

Translational control and target recognition by Escherichia coli small RNAs in vivo
por: Urban, Johannes H., et al.
Publicado: (2007)

Conformational changes in the expression domain of the Escherichia coli thiM riboswitch
por: Rentmeister, Andrea, et al.
Publicado: (2007)

Conservation of mRNA secondary structures may filter out mutations in Escherichia coli evolution
por: Chursov, Andrey, et al.
Publicado: (2013)

Transition-state stabilization in Escherichia coli ribonuclease P RNA-mediated cleavage of model substrates
por: Wu, Shiying, et al.
Publicado: (2014)

CRISPR RNA binding and DNA target recognition by purified Cascade complexes from Escherichia coli
por: Beloglazova, Natalia, et al.
Publicado: (2015)

Cellular and molecular phenotypes depending upon the RNA repair system RtcAB of Escherichia coli
por: Engl, Christoph, et al.
Publicado: (2016)

The conserved GTPase LepA contributes mainly to translation initiation in Escherichia coli
por: Balakrishnan, Rohan, et al.
Publicado: (2014)

Photorhabdus antibacterial Rhs polymorphic toxin inhibits translation through ADP-ribosylation of 23S ribosomal RNA
por: Jurėnas, Dukas, et al.
Publicado: (2021)

Cannot write session to /tmp/vufind_sessions/sess_727hhpd6lcg9cq4mel4l8iuj08