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ValiDichro: a website for validating and quality control of protein circular dichroism spectra

Circular dichroism (CD) spectroscopy is widely used in structural biology as a technique for examining the structure, folding and conformational changes of proteins. A new server, ValiDichro, has been developed for checking the quality and validity of CD spectral data and metadata, both as an aid to...

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Detalles Bibliográficos
Autores principales: Woollett, Benjamin, Whitmore, Lee, Janes, Robert W., Wallace, B. A.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Oxford University Press 2013
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3977657/
https://www.ncbi.nlm.nih.gov/pubmed/23625965
http://dx.doi.org/10.1093/nar/gkt287
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author Woollett, Benjamin
Whitmore, Lee
Janes, Robert W.
Wallace, B. A.
author_facet Woollett, Benjamin
Whitmore, Lee
Janes, Robert W.
Wallace, B. A.
author_sort Woollett, Benjamin
collection PubMed
description Circular dichroism (CD) spectroscopy is widely used in structural biology as a technique for examining the structure, folding and conformational changes of proteins. A new server, ValiDichro, has been developed for checking the quality and validity of CD spectral data and metadata, both as an aid to data collection and processing and as a validation procedure for spectra to be included in publications. ValiDichro currently includes 25 tests for data completeness, consistency and quality. For each test that is done, not only is a validation report produced, but the user is also provided with suggestions for correcting or improving the data. The ValiDichro server is freely available at http://valispec.cryst.bbk.ac.uk/circularDichroism/ValiDichro/upload.html.
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spelling pubmed-39776572014-04-07 ValiDichro: a website for validating and quality control of protein circular dichroism spectra Woollett, Benjamin Whitmore, Lee Janes, Robert W. Wallace, B. A. Nucleic Acids Res Articles Circular dichroism (CD) spectroscopy is widely used in structural biology as a technique for examining the structure, folding and conformational changes of proteins. A new server, ValiDichro, has been developed for checking the quality and validity of CD spectral data and metadata, both as an aid to data collection and processing and as a validation procedure for spectra to be included in publications. ValiDichro currently includes 25 tests for data completeness, consistency and quality. For each test that is done, not only is a validation report produced, but the user is also provided with suggestions for correcting or improving the data. The ValiDichro server is freely available at http://valispec.cryst.bbk.ac.uk/circularDichroism/ValiDichro/upload.html. Oxford University Press 2013-07 2013-04-26 /pmc/articles/PMC3977657/ /pubmed/23625965 http://dx.doi.org/10.1093/nar/gkt287 Text en © The Author(s) 2013. Published by Oxford University Press. http://creativecommons.org/licenses/by/3.0/ This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/3.0/), which permits unrestricted reuse, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Articles
Woollett, Benjamin
Whitmore, Lee
Janes, Robert W.
Wallace, B. A.
ValiDichro: a website for validating and quality control of protein circular dichroism spectra
title ValiDichro: a website for validating and quality control of protein circular dichroism spectra
title_full ValiDichro: a website for validating and quality control of protein circular dichroism spectra
title_fullStr ValiDichro: a website for validating and quality control of protein circular dichroism spectra
title_full_unstemmed ValiDichro: a website for validating and quality control of protein circular dichroism spectra
title_short ValiDichro: a website for validating and quality control of protein circular dichroism spectra
title_sort validichro: a website for validating and quality control of protein circular dichroism spectra
topic Articles
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3977657/
https://www.ncbi.nlm.nih.gov/pubmed/23625965
http://dx.doi.org/10.1093/nar/gkt287
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