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ValiDichro: a website for validating and quality control of protein circular dichroism spectra
Circular dichroism (CD) spectroscopy is widely used in structural biology as a technique for examining the structure, folding and conformational changes of proteins. A new server, ValiDichro, has been developed for checking the quality and validity of CD spectral data and metadata, both as an aid to...
Autores principales: | , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Oxford University Press
2013
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3977657/ https://www.ncbi.nlm.nih.gov/pubmed/23625965 http://dx.doi.org/10.1093/nar/gkt287 |
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author | Woollett, Benjamin Whitmore, Lee Janes, Robert W. Wallace, B. A. |
author_facet | Woollett, Benjamin Whitmore, Lee Janes, Robert W. Wallace, B. A. |
author_sort | Woollett, Benjamin |
collection | PubMed |
description | Circular dichroism (CD) spectroscopy is widely used in structural biology as a technique for examining the structure, folding and conformational changes of proteins. A new server, ValiDichro, has been developed for checking the quality and validity of CD spectral data and metadata, both as an aid to data collection and processing and as a validation procedure for spectra to be included in publications. ValiDichro currently includes 25 tests for data completeness, consistency and quality. For each test that is done, not only is a validation report produced, but the user is also provided with suggestions for correcting or improving the data. The ValiDichro server is freely available at http://valispec.cryst.bbk.ac.uk/circularDichroism/ValiDichro/upload.html. |
format | Online Article Text |
id | pubmed-3977657 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2013 |
publisher | Oxford University Press |
record_format | MEDLINE/PubMed |
spelling | pubmed-39776572014-04-07 ValiDichro: a website for validating and quality control of protein circular dichroism spectra Woollett, Benjamin Whitmore, Lee Janes, Robert W. Wallace, B. A. Nucleic Acids Res Articles Circular dichroism (CD) spectroscopy is widely used in structural biology as a technique for examining the structure, folding and conformational changes of proteins. A new server, ValiDichro, has been developed for checking the quality and validity of CD spectral data and metadata, both as an aid to data collection and processing and as a validation procedure for spectra to be included in publications. ValiDichro currently includes 25 tests for data completeness, consistency and quality. For each test that is done, not only is a validation report produced, but the user is also provided with suggestions for correcting or improving the data. The ValiDichro server is freely available at http://valispec.cryst.bbk.ac.uk/circularDichroism/ValiDichro/upload.html. Oxford University Press 2013-07 2013-04-26 /pmc/articles/PMC3977657/ /pubmed/23625965 http://dx.doi.org/10.1093/nar/gkt287 Text en © The Author(s) 2013. Published by Oxford University Press. http://creativecommons.org/licenses/by/3.0/ This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/3.0/), which permits unrestricted reuse, distribution, and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Articles Woollett, Benjamin Whitmore, Lee Janes, Robert W. Wallace, B. A. ValiDichro: a website for validating and quality control of protein circular dichroism spectra |
title | ValiDichro: a website for validating and quality control of protein circular
dichroism spectra |
title_full | ValiDichro: a website for validating and quality control of protein circular
dichroism spectra |
title_fullStr | ValiDichro: a website for validating and quality control of protein circular
dichroism spectra |
title_full_unstemmed | ValiDichro: a website for validating and quality control of protein circular
dichroism spectra |
title_short | ValiDichro: a website for validating and quality control of protein circular
dichroism spectra |
title_sort | validichro: a website for validating and quality control of protein circular
dichroism spectra |
topic | Articles |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3977657/ https://www.ncbi.nlm.nih.gov/pubmed/23625965 http://dx.doi.org/10.1093/nar/gkt287 |
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