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The quail anatomy portal

The Japanese quail is a widely used model organism for the study of embryonic development; however, anatomical resources are lacking. The Quail Anatomy Portal (QAP) provides 22 detailed three-dimensional (3D) models of quail embryos during development from embryonic day (E)1 to E15 generated using o...

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Autores principales: Ruparelia, Avnika A., Simkin, Johanna E., Salgado, David, Newgreen, Donald F., Martins, Gabriel G., Bryson-Richardson, Robert J.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Oxford University Press 2014
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3978374/
https://www.ncbi.nlm.nih.gov/pubmed/24715219
http://dx.doi.org/10.1093/database/bau028
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author Ruparelia, Avnika A.
Simkin, Johanna E.
Salgado, David
Newgreen, Donald F.
Martins, Gabriel G.
Bryson-Richardson, Robert J.
author_facet Ruparelia, Avnika A.
Simkin, Johanna E.
Salgado, David
Newgreen, Donald F.
Martins, Gabriel G.
Bryson-Richardson, Robert J.
author_sort Ruparelia, Avnika A.
collection PubMed
description The Japanese quail is a widely used model organism for the study of embryonic development; however, anatomical resources are lacking. The Quail Anatomy Portal (QAP) provides 22 detailed three-dimensional (3D) models of quail embryos during development from embryonic day (E)1 to E15 generated using optical projection tomography. The 3D models provided can be virtually sectioned to investigate anatomy. Furthermore, using the 3D nature of the models, we have generated a tool to assist in the staging of quail samples. Volume renderings of each stage are provided and can be rotated to allow visualization from multiple angles allowing easy comparison of features both between stages in the database and between images or samples in the laboratory. The use of JavaScript, PHP and HTML ensure the database is accessible to users across different operating systems, including mobile devices, facilitating its use in the laboratory.The QAP provides a unique resource for researchers using the quail model. The ability to virtually section anatomical models throughout development provides the opportunity for researchers to virtually dissect the quail and also provides a valuable tool for the education of students and researchers new to the field. Database URL: http://quail.anatomyportal.org (For review username: demo, password: quail123)
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spelling pubmed-39783742014-04-09 The quail anatomy portal Ruparelia, Avnika A. Simkin, Johanna E. Salgado, David Newgreen, Donald F. Martins, Gabriel G. Bryson-Richardson, Robert J. Database (Oxford) Database Tool The Japanese quail is a widely used model organism for the study of embryonic development; however, anatomical resources are lacking. The Quail Anatomy Portal (QAP) provides 22 detailed three-dimensional (3D) models of quail embryos during development from embryonic day (E)1 to E15 generated using optical projection tomography. The 3D models provided can be virtually sectioned to investigate anatomy. Furthermore, using the 3D nature of the models, we have generated a tool to assist in the staging of quail samples. Volume renderings of each stage are provided and can be rotated to allow visualization from multiple angles allowing easy comparison of features both between stages in the database and between images or samples in the laboratory. The use of JavaScript, PHP and HTML ensure the database is accessible to users across different operating systems, including mobile devices, facilitating its use in the laboratory.The QAP provides a unique resource for researchers using the quail model. The ability to virtually section anatomical models throughout development provides the opportunity for researchers to virtually dissect the quail and also provides a valuable tool for the education of students and researchers new to the field. Database URL: http://quail.anatomyportal.org (For review username: demo, password: quail123) Oxford University Press 2014-04-07 /pmc/articles/PMC3978374/ /pubmed/24715219 http://dx.doi.org/10.1093/database/bau028 Text en © The Author(s) 2014. Published by Oxford University Press. http://creativecommons.org/licenses/by/3.0/ This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/3.0/), which permits unrestricted reuse, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Database Tool
Ruparelia, Avnika A.
Simkin, Johanna E.
Salgado, David
Newgreen, Donald F.
Martins, Gabriel G.
Bryson-Richardson, Robert J.
The quail anatomy portal
title The quail anatomy portal
title_full The quail anatomy portal
title_fullStr The quail anatomy portal
title_full_unstemmed The quail anatomy portal
title_short The quail anatomy portal
title_sort quail anatomy portal
topic Database Tool
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3978374/
https://www.ncbi.nlm.nih.gov/pubmed/24715219
http://dx.doi.org/10.1093/database/bau028
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