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Implementing a successful data-management framework: the UK10K managed access model

This paper outlines the history behind open access principles and describes the development of a managed access data-sharing process for the UK10K Project, currently Britain’s largest genomic sequencing consortium (2010 to 2013). Funded by the Wellcome Trust, the purpose of UK10K was two-fold: to in...

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Detalles Bibliográficos
Autores principales: Muddyman, Dawn, Smee, Carol, Griffin, Heather, Kaye, Jane
Formato: Online Artículo Texto
Lenguaje:English
Publicado: BioMed Central 2013
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3978569/
https://www.ncbi.nlm.nih.gov/pubmed/24229443
http://dx.doi.org/10.1186/gm504
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author Muddyman, Dawn
Smee, Carol
Griffin, Heather
Kaye, Jane
author_facet Muddyman, Dawn
Smee, Carol
Griffin, Heather
Kaye, Jane
author_sort Muddyman, Dawn
collection PubMed
description This paper outlines the history behind open access principles and describes the development of a managed access data-sharing process for the UK10K Project, currently Britain’s largest genomic sequencing consortium (2010 to 2013). Funded by the Wellcome Trust, the purpose of UK10K was two-fold: to investigate how low-frequency and rare genetic variants contribute to human disease, and to provide an enduring data resource for future research into human genetics. In this paper, we discuss the challenge of reconciling data-sharing principles with the practicalities of delivering a sequencing project of UK10K’s scope and magnitude. We describe the development of a sustainable, easy-to-use managed access system that allowed rapid access to UK10K data, while protecting the interests of participants and data generators alike. Specifically, we focus in depth on the three key issues that emerge in the data pipeline: study recruitment, data release and data access.
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spelling pubmed-39785692014-04-12 Implementing a successful data-management framework: the UK10K managed access model Muddyman, Dawn Smee, Carol Griffin, Heather Kaye, Jane Genome Med Correspondence This paper outlines the history behind open access principles and describes the development of a managed access data-sharing process for the UK10K Project, currently Britain’s largest genomic sequencing consortium (2010 to 2013). Funded by the Wellcome Trust, the purpose of UK10K was two-fold: to investigate how low-frequency and rare genetic variants contribute to human disease, and to provide an enduring data resource for future research into human genetics. In this paper, we discuss the challenge of reconciling data-sharing principles with the practicalities of delivering a sequencing project of UK10K’s scope and magnitude. We describe the development of a sustainable, easy-to-use managed access system that allowed rapid access to UK10K data, while protecting the interests of participants and data generators alike. Specifically, we focus in depth on the three key issues that emerge in the data pipeline: study recruitment, data release and data access. BioMed Central 2013-11-15 /pmc/articles/PMC3978569/ /pubmed/24229443 http://dx.doi.org/10.1186/gm504 Text en Copyright © 2013 BioMed Central Ltd.
spellingShingle Correspondence
Muddyman, Dawn
Smee, Carol
Griffin, Heather
Kaye, Jane
Implementing a successful data-management framework: the UK10K managed access model
title Implementing a successful data-management framework: the UK10K managed access model
title_full Implementing a successful data-management framework: the UK10K managed access model
title_fullStr Implementing a successful data-management framework: the UK10K managed access model
title_full_unstemmed Implementing a successful data-management framework: the UK10K managed access model
title_short Implementing a successful data-management framework: the UK10K managed access model
title_sort implementing a successful data-management framework: the uk10k managed access model
topic Correspondence
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3978569/
https://www.ncbi.nlm.nih.gov/pubmed/24229443
http://dx.doi.org/10.1186/gm504
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