Cargando…

Enhancing Genome-Enabled Prediction by Bagging Genomic BLUP

We examined whether or not the predictive ability of genomic best linear unbiased prediction (GBLUP) could be improved via a resampling method used in machine learning: bootstrap aggregating sampling (“bagging”). In theory, bagging can be useful when the predictor has large variance or when the numb...

Descripción completa

Detalles Bibliográficos
Autores principales:	Gianola, Daniel, Weigel, Kent A., Krämer, Nicole, Stella, Alessandra, Schön, Chris-Carolin
Formato:	Online Artículo Texto
Lenguaje:	English
Publicado:	Public Library of Science 2014
Materias:	Research Article
Acceso en línea:	https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3982963/ https://www.ncbi.nlm.nih.gov/pubmed/24722227 http://dx.doi.org/10.1371/journal.pone.0091693

Ejemplares similares

Cross-Validation Without Doing Cross-Validation in Genome-Enabled Prediction
por: Gianola, Daniel, et al.
Publicado: (2016)

Ecriture des équations du BLUP multicaractères
por: Foulley, JL, et al.
Publicado: (1982)

Accuracy of Genome-Enabled Prediction in a Dairy Cattle Population using Different Cross-Validation Layouts
por: Pérez-Cabal, M. Angeles, et al.
Publicado: (2012)

Single-step genomic BLUP with many metafounders
por: Kudinov, Andrei A., et al.
Publicado: (2022)

Genome-Wide Association Studies with a Genomic Relationship Matrix: A Case Study with Wheat and Arabidopsis
por: Gianola, Daniel, et al.
Publicado: (2016)

Simultaneous fitting of genomic-BLUP and Bayes-C components in a genomic prediction model
por: Iheshiulor, Oscar O. M., et al.
Publicado: (2017)

Including Dominance Effects in the Genomic BLUP Method for Genomic Evaluation
por: Nishio, Motohide, et al.
Publicado: (2014)

Comparison of the Efficiency of BLUP and GBLUP in Genomic Prediction of Immune Traits in Chickens
por: Zhang, Jin, et al.
Publicado: (2020)

Effect of BLUP prediction on genomic selection: practical considerations to achieve greater accuracy in genomic selection
por: Munoz, Patricio, et al.
Publicado: (2011)

Expanding the BLUP alphabet for genomic prediction adaptable to the genetic architectures of complex traits
por: Wang, Jiabo, et al.
Publicado: (2018)

Effect of non-random mating on genomic and BLUP selection schemes
por: Nirea, Kahsay G, et al.
Publicado: (2012)

Single-step genomic BLUP enables joint analysis of disconnected breeding programs: an example with Eucalyptus globulus Labill
por: Callister, Andrew N, et al.
Publicado: (2021)

Genome-enabled prediction of quantitative traits in chickens using genomic annotation
por: Morota, Gota, et al.
Publicado: (2014)

Bayesian Networks Illustrate Genomic and Residual Trait Connections in Maize (Zea mays L.)
por: Töpner, Katrin, et al.
Publicado: (2017)

Prediction of Complex Traits: Robust Alternatives to Best Linear Unbiased Prediction
por: Gianola, Daniel, et al.
Publicado: (2018)

Bayesian Genomic-Enabled Prediction as an Inverse Problem
por: Cuevas, Jaime, et al.
Publicado: (2014)

Cow evaluation with blup
por: Graser, HU
Publicado: (1980)

Accounting for genomic pre-selection in national BLUP evaluations in dairy cattle
por: Patry, Clotilde, et al.
Publicado: (2011)

Genome-assisted prediction of a quantitative trait measured in parents and progeny: application to food conversion rate in chickens
por: González-Recio, Oscar, et al.
Publicado: (2009)

Extensions of BLUP Models for Genomic Prediction in Heterogeneous Populations: Application in a Diverse Switchgrass Sample
por: Ramstein, Guillaume P., et al.
Publicado: (2019)

Single-step genomic BLUP with genetic groups and automatic adjustment for allele coding
por: Strandén, Ismo, et al.
Publicado: (2022)

A Multiple-Trait Bayesian Lasso for Genome-Enabled Analysis and Prediction of Complex Traits
por: Gianola, Daniel, et al.
Publicado: (2020)

Avoiding preselection bias in subsequent single‐step genomic BLUP evaluations of genomically preselected animals
por: Jibrila, Ibrahim, et al.
Publicado: (2020)

Calibration and validation of predicted genomic breeding values in an advanced cycle maize population
por: Auinger, Hans-Jürgen, et al.
Publicado: (2021)

Effect of genotyping strategies on the sustained benefit of single-step genomic BLUP over multiple generations
por: Sánchez-Mayor, Milagros, et al.
Publicado: (2022)

Genome-enabled prediction using probabilistic neural network classifiers
por: González-Camacho, Juan Manuel, et al.
Publicado: (2016)

Inference about quantitative traits under selection: a Bayesian revisitation for the post-genomic era
por: Gianola, Daniel, et al.
Publicado: (2022)

Comparison of conventional BLUP and single-step genomic BLUP evaluations for yearling weight and carcass traits in Hanwoo beef cattle using single trait and multi-trait models
por: Mehrban, Hossein, et al.
Publicado: (2019)

Comparison on genomic prediction using pedigree BLUP and single step GBLUP through the Hanwoo full-sib family
por: Kim, Eun-Ho, et al.
Publicado: (2023)

Investigating the impact of preselection on subsequent single-step genomic BLUP evaluation of preselected animals
por: Jibrila, Ibrahim, et al.
Publicado: (2020)

Genomic Prediction Using Alternative Strategies of Weighted Single-Step Genomic BLUP for Yearling Weight and Carcass Traits in Hanwoo Beef Cattle
por: Mehrban, Hossein, et al.
Publicado: (2021)

MultiBLUP: improved SNP-based prediction for complex traits
por: Speed, Doug, et al.
Publicado: (2014)

Avoiding the misuse of BLUP in behavioural ecology
por: Houslay, Thomas M, et al.
Publicado: (2017)

Fast Genomic Predictions via Bayesian G-BLUP and Multilocus Models of Threshold Traits Including Censored Gaussian Data
por: Kärkkäinen, Hanni P., et al.
Publicado: (2013)

Performances of Adaptive MultiBLUP, Bayesian regressions, and weighted-GBLUP approaches for genomic predictions in Belgian Blue beef cattle
por: Gualdrón Duarte, José Luis, et al.
Publicado: (2020)

Genomic BLUP including additive and dominant variation in purebreds and F1 crossbreds, with an application in pigs
por: Vitezica, Zulma G., et al.
Publicado: (2016)

Weighting Strategies for Single-Step Genomic BLUP: An Iterative Approach for Accurate Calculation of GEBV and GWAS
por: Zhang, Xinyue, et al.
Publicado: (2016)

An alternative derivation method of mixed model equations from best linear unbiased prediction (BLUP) and restricted BLUP of breeding values not using maximum likelihood
por: Satoh, Masahiro
Publicado: (2018)

Effect of genotype imputation on genome-enabled prediction of complex traits: an empirical study with mice data
por: Felipe, Vivian PS, et al.
Publicado: (2014)

Accuracy of genomic BLUP when considering a genomic relationship matrix based on the number of the largest eigenvalues: a simulation study
por: Pocrnic, Ivan, et al.
Publicado: (2019)

Cannot write session to /tmp/vufind_sessions/sess_b906gvqtagj4mpe4879diltsuv