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Biophysical Properties of Intrinsically Disordered p130Cas Substrate Domain — Implication in Mechanosensing

Mechanical stretch-induced tyrosine phosphorylation in the proline-rich 306-residue substrate domain (CasSD) of p130Cas (or BCAR1) has eluded an experimentally validated structural understanding. Cellular p130Cas tyrosine phosphorylation is shown to function in areas without internal actomyosin cont...

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Autores principales: Hotta, Kinya, Ranganathan, Soumya, Liu, Ruchuan, Wu, Fei, Machiyama, Hiroaki, Gao, Rong, Hirata, Hiroaki, Soni, Neelesh, Ohe, Takashi, Hogue, Christopher W. V., Madhusudhan, M. S., Sawada, Yasuhiro
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Public Library of Science 2014
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3983058/
https://www.ncbi.nlm.nih.gov/pubmed/24722239
http://dx.doi.org/10.1371/journal.pcbi.1003532
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author Hotta, Kinya
Ranganathan, Soumya
Liu, Ruchuan
Wu, Fei
Machiyama, Hiroaki
Gao, Rong
Hirata, Hiroaki
Soni, Neelesh
Ohe, Takashi
Hogue, Christopher W. V.
Madhusudhan, M. S.
Sawada, Yasuhiro
author_facet Hotta, Kinya
Ranganathan, Soumya
Liu, Ruchuan
Wu, Fei
Machiyama, Hiroaki
Gao, Rong
Hirata, Hiroaki
Soni, Neelesh
Ohe, Takashi
Hogue, Christopher W. V.
Madhusudhan, M. S.
Sawada, Yasuhiro
author_sort Hotta, Kinya
collection PubMed
description Mechanical stretch-induced tyrosine phosphorylation in the proline-rich 306-residue substrate domain (CasSD) of p130Cas (or BCAR1) has eluded an experimentally validated structural understanding. Cellular p130Cas tyrosine phosphorylation is shown to function in areas without internal actomyosin contractility, sensing force at the leading edge of cell migration. Circular dichroism shows CasSD is intrinsically disordered with dominant polyproline type II conformations. Strongly conserved in placental mammals, the proline-rich sequence exhibits a pseudo-repeat unit with variation hotspots 2–9 residues before substrate tyrosine residues. Atomic-force microscopy pulling experiments show CasSD requires minimal extension force and exhibits infrequent, random regions of weak stability. Proteolysis, light scattering and ultracentrifugation results show that a monomeric intrinsically disordered form persists for CasSD in solution with an expanded hydrodynamic radius. All-atom 3D conformer sampling with the TraDES package yields ensembles in agreement with experiment when coil-biased sampling is used, matching the experimental radius of gyration. Increasing β-sampling propensities increases the number of prolate conformers. Combining the results, we conclude that CasSD has no stable compact structure and is unlikely to efficiently autoinhibit phosphorylation. Taking into consideration the structural propensity of CasSD and the fact that it is known to bind to LIM domains, we propose a model of how CasSD and LIM domain family of transcription factor proteins may function together to regulate phosphorylation of CasSD and effect machanosensing.
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spelling pubmed-39830582014-04-15 Biophysical Properties of Intrinsically Disordered p130Cas Substrate Domain — Implication in Mechanosensing Hotta, Kinya Ranganathan, Soumya Liu, Ruchuan Wu, Fei Machiyama, Hiroaki Gao, Rong Hirata, Hiroaki Soni, Neelesh Ohe, Takashi Hogue, Christopher W. V. Madhusudhan, M. S. Sawada, Yasuhiro PLoS Comput Biol Research Article Mechanical stretch-induced tyrosine phosphorylation in the proline-rich 306-residue substrate domain (CasSD) of p130Cas (or BCAR1) has eluded an experimentally validated structural understanding. Cellular p130Cas tyrosine phosphorylation is shown to function in areas without internal actomyosin contractility, sensing force at the leading edge of cell migration. Circular dichroism shows CasSD is intrinsically disordered with dominant polyproline type II conformations. Strongly conserved in placental mammals, the proline-rich sequence exhibits a pseudo-repeat unit with variation hotspots 2–9 residues before substrate tyrosine residues. Atomic-force microscopy pulling experiments show CasSD requires minimal extension force and exhibits infrequent, random regions of weak stability. Proteolysis, light scattering and ultracentrifugation results show that a monomeric intrinsically disordered form persists for CasSD in solution with an expanded hydrodynamic radius. All-atom 3D conformer sampling with the TraDES package yields ensembles in agreement with experiment when coil-biased sampling is used, matching the experimental radius of gyration. Increasing β-sampling propensities increases the number of prolate conformers. Combining the results, we conclude that CasSD has no stable compact structure and is unlikely to efficiently autoinhibit phosphorylation. Taking into consideration the structural propensity of CasSD and the fact that it is known to bind to LIM domains, we propose a model of how CasSD and LIM domain family of transcription factor proteins may function together to regulate phosphorylation of CasSD and effect machanosensing. Public Library of Science 2014-04-10 /pmc/articles/PMC3983058/ /pubmed/24722239 http://dx.doi.org/10.1371/journal.pcbi.1003532 Text en © 2014 Hotta et al http://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are properly credited.
spellingShingle Research Article
Hotta, Kinya
Ranganathan, Soumya
Liu, Ruchuan
Wu, Fei
Machiyama, Hiroaki
Gao, Rong
Hirata, Hiroaki
Soni, Neelesh
Ohe, Takashi
Hogue, Christopher W. V.
Madhusudhan, M. S.
Sawada, Yasuhiro
Biophysical Properties of Intrinsically Disordered p130Cas Substrate Domain — Implication in Mechanosensing
title Biophysical Properties of Intrinsically Disordered p130Cas Substrate Domain — Implication in Mechanosensing
title_full Biophysical Properties of Intrinsically Disordered p130Cas Substrate Domain — Implication in Mechanosensing
title_fullStr Biophysical Properties of Intrinsically Disordered p130Cas Substrate Domain — Implication in Mechanosensing
title_full_unstemmed Biophysical Properties of Intrinsically Disordered p130Cas Substrate Domain — Implication in Mechanosensing
title_short Biophysical Properties of Intrinsically Disordered p130Cas Substrate Domain — Implication in Mechanosensing
title_sort biophysical properties of intrinsically disordered p130cas substrate domain — implication in mechanosensing
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3983058/
https://www.ncbi.nlm.nih.gov/pubmed/24722239
http://dx.doi.org/10.1371/journal.pcbi.1003532
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