FeatureViewer, a BioJS component for visualization of position-based annotations in protein sequences

Summary: FeatureViewer is a BioJS component that lays out, maps, orients, and renders position-based annotations for protein sequences. This component is highly flexible and customizable, allowing the presentation of annotations by rows, all centered, or distributed in non-overlapping tracks. It use...

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Detalles Bibliográficos
Autores principales: Garcia, Leyla, Yachdav, Guy, Martin, Maria-Jesus
Formato: Online Artículo Texto
Lenguaje:English
Publicado: F1000Research 2014
Materias:
Web Tool
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3983936/
https://www.ncbi.nlm.nih.gov/pubmed/24741440
http://dx.doi.org/10.12688/f1000research.3-47.v2
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author Garcia, Leyla
Yachdav, Guy
Martin, Maria-Jesus
author_facet Garcia, Leyla
Yachdav, Guy
Martin, Maria-Jesus
author_sort Garcia, Leyla
collection PubMed
description Summary: FeatureViewer is a BioJS component that lays out, maps, orients, and renders position-based annotations for protein sequences. This component is highly flexible and customizable, allowing the presentation of annotations by rows, all centered, or distributed in non-overlapping tracks. It uses either lines or shapes for sites and rectangles for regions. The result is a powerful visualization tool that can be easily integrated into web applications as well as documents as it provides an export-to-image functionality. Availability: https://github.com/biojs/biojs/blob/master/src/main/javascript/Biojs.FeatureViewer.js; http://dx.doi.org/10.5281/zenodo.7719
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spelling pubmed-39839362014-04-15 FeatureViewer, a BioJS component for visualization of position-based annotations in protein sequences Garcia, Leyla Yachdav, Guy Martin, Maria-Jesus F1000Res Web Tool Summary: FeatureViewer is a BioJS component that lays out, maps, orients, and renders position-based annotations for protein sequences. This component is highly flexible and customizable, allowing the presentation of annotations by rows, all centered, or distributed in non-overlapping tracks. It uses either lines or shapes for sites and rectangles for regions. The result is a powerful visualization tool that can be easily integrated into web applications as well as documents as it provides an export-to-image functionality. Availability: https://github.com/biojs/biojs/blob/master/src/main/javascript/Biojs.FeatureViewer.js; http://dx.doi.org/10.5281/zenodo.7719 F1000Research 2014-04-09 /pmc/articles/PMC3983936/ /pubmed/24741440 http://dx.doi.org/10.12688/f1000research.3-47.v2 Text en Copyright: © 2014 Garcia L et al. http://creativecommons.org/licenses/by/3.0/ This is an open access article distributed under the terms of the Creative Commons Attribution Licence, which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Web Tool
Garcia, Leyla
Yachdav, Guy
Martin, Maria-Jesus
FeatureViewer, a BioJS component for visualization of position-based annotations in protein sequences
title FeatureViewer, a BioJS component for visualization of position-based annotations in protein sequences
title_full FeatureViewer, a BioJS component for visualization of position-based annotations in protein sequences
title_fullStr FeatureViewer, a BioJS component for visualization of position-based annotations in protein sequences
title_full_unstemmed FeatureViewer, a BioJS component for visualization of position-based annotations in protein sequences
title_short FeatureViewer, a BioJS component for visualization of position-based annotations in protein sequences
title_sort featureviewer, a biojs component for visualization of position-based annotations in protein sequences
topic Web Tool
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3983936/
https://www.ncbi.nlm.nih.gov/pubmed/24741440
http://dx.doi.org/10.12688/f1000research.3-47.v2
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