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A Robust Post-Processing Workflow for Datasets with Motion Artifacts in Diffusion Kurtosis Imaging
PURPOSE: The aim of this study was to develop a robust post-processing workflow for motion-corrupted datasets in diffusion kurtosis imaging (DKI). MATERIALS AND METHODS: The proposed workflow consisted of brain extraction, rigid registration, distortion correction, artifacts rejection, spatial smoot...
Autores principales: | , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Public Library of Science
2014
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3984238/ https://www.ncbi.nlm.nih.gov/pubmed/24727862 http://dx.doi.org/10.1371/journal.pone.0094592 |
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author | Li, Xianjun Yang, Jian Gao, Jie Luo, Xue Zhou, Zhenyu Hu, Yajie Wu, Ed X. Wan, Mingxi |
author_facet | Li, Xianjun Yang, Jian Gao, Jie Luo, Xue Zhou, Zhenyu Hu, Yajie Wu, Ed X. Wan, Mingxi |
author_sort | Li, Xianjun |
collection | PubMed |
description | PURPOSE: The aim of this study was to develop a robust post-processing workflow for motion-corrupted datasets in diffusion kurtosis imaging (DKI). MATERIALS AND METHODS: The proposed workflow consisted of brain extraction, rigid registration, distortion correction, artifacts rejection, spatial smoothing and tensor estimation. Rigid registration was utilized to correct misalignments. Motion artifacts were rejected by using local Pearson correlation coefficient (LPCC). The performance of LPCC in characterizing relative differences between artifacts and artifact-free images was compared with that of the conventional correlation coefficient in 10 randomly selected DKI datasets. The influence of rejected artifacts with information of gradient directions and b values for the parameter estimation was investigated by using mean square error (MSE). The variance of noise was used as the criterion for MSEs. The clinical practicality of the proposed workflow was evaluated by the image quality and measurements in regions of interest on 36 DKI datasets, including 18 artifact-free (18 pediatric subjects) and 18 motion-corrupted datasets (15 pediatric subjects and 3 essential tremor patients). RESULTS: The relative difference between artifacts and artifact-free images calculated by LPCC was larger than that of the conventional correlation coefficient (p<0.05). It indicated that LPCC was more sensitive in detecting motion artifacts. MSEs of all derived parameters from the reserved data after the artifacts rejection were smaller than the variance of the noise. It suggested that influence of rejected artifacts was less than influence of noise on the precision of derived parameters. The proposed workflow improved the image quality and reduced the measurement biases significantly on motion-corrupted datasets (p<0.05). CONCLUSION: The proposed post-processing workflow was reliable to improve the image quality and the measurement precision of the derived parameters on motion-corrupted DKI datasets. The workflow provided an effective post-processing method for clinical applications of DKI in subjects with involuntary movements. |
format | Online Article Text |
id | pubmed-3984238 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2014 |
publisher | Public Library of Science |
record_format | MEDLINE/PubMed |
spelling | pubmed-39842382014-04-15 A Robust Post-Processing Workflow for Datasets with Motion Artifacts in Diffusion Kurtosis Imaging Li, Xianjun Yang, Jian Gao, Jie Luo, Xue Zhou, Zhenyu Hu, Yajie Wu, Ed X. Wan, Mingxi PLoS One Research Article PURPOSE: The aim of this study was to develop a robust post-processing workflow for motion-corrupted datasets in diffusion kurtosis imaging (DKI). MATERIALS AND METHODS: The proposed workflow consisted of brain extraction, rigid registration, distortion correction, artifacts rejection, spatial smoothing and tensor estimation. Rigid registration was utilized to correct misalignments. Motion artifacts were rejected by using local Pearson correlation coefficient (LPCC). The performance of LPCC in characterizing relative differences between artifacts and artifact-free images was compared with that of the conventional correlation coefficient in 10 randomly selected DKI datasets. The influence of rejected artifacts with information of gradient directions and b values for the parameter estimation was investigated by using mean square error (MSE). The variance of noise was used as the criterion for MSEs. The clinical practicality of the proposed workflow was evaluated by the image quality and measurements in regions of interest on 36 DKI datasets, including 18 artifact-free (18 pediatric subjects) and 18 motion-corrupted datasets (15 pediatric subjects and 3 essential tremor patients). RESULTS: The relative difference between artifacts and artifact-free images calculated by LPCC was larger than that of the conventional correlation coefficient (p<0.05). It indicated that LPCC was more sensitive in detecting motion artifacts. MSEs of all derived parameters from the reserved data after the artifacts rejection were smaller than the variance of the noise. It suggested that influence of rejected artifacts was less than influence of noise on the precision of derived parameters. The proposed workflow improved the image quality and reduced the measurement biases significantly on motion-corrupted datasets (p<0.05). CONCLUSION: The proposed post-processing workflow was reliable to improve the image quality and the measurement precision of the derived parameters on motion-corrupted DKI datasets. The workflow provided an effective post-processing method for clinical applications of DKI in subjects with involuntary movements. Public Library of Science 2014-04-11 /pmc/articles/PMC3984238/ /pubmed/24727862 http://dx.doi.org/10.1371/journal.pone.0094592 Text en © 2014 Li et al http://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are properly credited. |
spellingShingle | Research Article Li, Xianjun Yang, Jian Gao, Jie Luo, Xue Zhou, Zhenyu Hu, Yajie Wu, Ed X. Wan, Mingxi A Robust Post-Processing Workflow for Datasets with Motion Artifacts in Diffusion Kurtosis Imaging |
title | A Robust Post-Processing Workflow for Datasets with Motion Artifacts in Diffusion Kurtosis Imaging |
title_full | A Robust Post-Processing Workflow for Datasets with Motion Artifacts in Diffusion Kurtosis Imaging |
title_fullStr | A Robust Post-Processing Workflow for Datasets with Motion Artifacts in Diffusion Kurtosis Imaging |
title_full_unstemmed | A Robust Post-Processing Workflow for Datasets with Motion Artifacts in Diffusion Kurtosis Imaging |
title_short | A Robust Post-Processing Workflow for Datasets with Motion Artifacts in Diffusion Kurtosis Imaging |
title_sort | robust post-processing workflow for datasets with motion artifacts in diffusion kurtosis imaging |
topic | Research Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3984238/ https://www.ncbi.nlm.nih.gov/pubmed/24727862 http://dx.doi.org/10.1371/journal.pone.0094592 |
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