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Mining a database of single amplified genomes from Red Sea brine pool extremophiles—improving reliability of gene function prediction using a profile and pattern matching algorithm (PPMA)
Reliable functional annotation of genomic data is the key-step in the discovery of novel enzymes. Intrinsic sequencing data quality problems of single amplified genomes (SAGs) and poor homology of novel extremophile's genomes pose significant challenges for the attribution of functions to the c...
Autores principales: | Grötzinger, Stefan W., Alam, Intikhab, Ba Alawi, Wail, Bajic, Vladimir B., Stingl, Ulrich, Eppinger, Jörg |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Frontiers Media S.A.
2014
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3985023/ https://www.ncbi.nlm.nih.gov/pubmed/24778629 http://dx.doi.org/10.3389/fmicb.2014.00134 |
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