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Designing of promiscuous inhibitors against pancreatic cancer cell lines

Pancreatic cancer remains the most devastating disease with worst prognosis. There is a pressing need to accelerate the drug discovery process to identify new effective drug candidates against pancreatic cancer. We have developed QSAR models for predicting promiscuous inhibitors using the pharmacolo...

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Autores principales: Kumar, Rahul, Chaudhary, Kumardeep, Singla, Deepak, Gautam, Ankur, Raghava, Gajendra P. S.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Nature Publishing Group 2014
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3985076/
https://www.ncbi.nlm.nih.gov/pubmed/24728108
http://dx.doi.org/10.1038/srep04668
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author Kumar, Rahul
Chaudhary, Kumardeep
Singla, Deepak
Gautam, Ankur
Raghava, Gajendra P. S.
author_facet Kumar, Rahul
Chaudhary, Kumardeep
Singla, Deepak
Gautam, Ankur
Raghava, Gajendra P. S.
author_sort Kumar, Rahul
collection PubMed
description Pancreatic cancer remains the most devastating disease with worst prognosis. There is a pressing need to accelerate the drug discovery process to identify new effective drug candidates against pancreatic cancer. We have developed QSAR models for predicting promiscuous inhibitors using the pharmacological data. Our models achieved maximum Pearson correlation coefficient of 0.86, when evaluated on 10-fold cross-validation. Our models have also successfully validated the drug-to-oncogene relationship and further we used these models to screen FDA approved drugs and tested them in vitro. We have integrated these models in a webserver named as DiPCell, which will be useful for screening and designing novel promiscuous drug molecules. We have also identified the most and least effective drugs for pancreatic cancer cell lines. On the other side, we have identified resistant pancreatic cancer cell lines, which need investigative scanner on them to put light on resistant mechanism in pancreatic cancer.
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spelling pubmed-39850762014-04-18 Designing of promiscuous inhibitors against pancreatic cancer cell lines Kumar, Rahul Chaudhary, Kumardeep Singla, Deepak Gautam, Ankur Raghava, Gajendra P. S. Sci Rep Article Pancreatic cancer remains the most devastating disease with worst prognosis. There is a pressing need to accelerate the drug discovery process to identify new effective drug candidates against pancreatic cancer. We have developed QSAR models for predicting promiscuous inhibitors using the pharmacological data. Our models achieved maximum Pearson correlation coefficient of 0.86, when evaluated on 10-fold cross-validation. Our models have also successfully validated the drug-to-oncogene relationship and further we used these models to screen FDA approved drugs and tested them in vitro. We have integrated these models in a webserver named as DiPCell, which will be useful for screening and designing novel promiscuous drug molecules. We have also identified the most and least effective drugs for pancreatic cancer cell lines. On the other side, we have identified resistant pancreatic cancer cell lines, which need investigative scanner on them to put light on resistant mechanism in pancreatic cancer. Nature Publishing Group 2014-04-14 /pmc/articles/PMC3985076/ /pubmed/24728108 http://dx.doi.org/10.1038/srep04668 Text en Copyright © 2014, Macmillan Publishers Limited. All rights reserved http://creativecommons.org/licenses/by-nc-sa/3.0/ This work is licensed under a Creative Commons Attribution-NonCommercial-ShareAlike 3.0 Unported License. The images in this article are included in the article's Creative Commons license, unless indicated otherwise in the image credit; if the image is not included under the Creative Commons license, users will need to obtain permission from the license holder in order to reproduce the image. To view a copy of this license, visit http://creativecommons.org/licenses/by-nc-sa/3.0/
spellingShingle Article
Kumar, Rahul
Chaudhary, Kumardeep
Singla, Deepak
Gautam, Ankur
Raghava, Gajendra P. S.
Designing of promiscuous inhibitors against pancreatic cancer cell lines
title Designing of promiscuous inhibitors against pancreatic cancer cell lines
title_full Designing of promiscuous inhibitors against pancreatic cancer cell lines
title_fullStr Designing of promiscuous inhibitors against pancreatic cancer cell lines
title_full_unstemmed Designing of promiscuous inhibitors against pancreatic cancer cell lines
title_short Designing of promiscuous inhibitors against pancreatic cancer cell lines
title_sort designing of promiscuous inhibitors against pancreatic cancer cell lines
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3985076/
https://www.ncbi.nlm.nih.gov/pubmed/24728108
http://dx.doi.org/10.1038/srep04668
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