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Designing of promiscuous inhibitors against pancreatic cancer cell lines
Pancreatic cancer remains the most devastating disease with worst prognosis. There is a pressing need to accelerate the drug discovery process to identify new effective drug candidates against pancreatic cancer. We have developed QSAR models for predicting promiscuous inhibitors using the pharmacolo...
Autores principales: | , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Nature Publishing Group
2014
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3985076/ https://www.ncbi.nlm.nih.gov/pubmed/24728108 http://dx.doi.org/10.1038/srep04668 |
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author | Kumar, Rahul Chaudhary, Kumardeep Singla, Deepak Gautam, Ankur Raghava, Gajendra P. S. |
author_facet | Kumar, Rahul Chaudhary, Kumardeep Singla, Deepak Gautam, Ankur Raghava, Gajendra P. S. |
author_sort | Kumar, Rahul |
collection | PubMed |
description | Pancreatic cancer remains the most devastating disease with worst prognosis. There is a pressing need to accelerate the drug discovery process to identify new effective drug candidates against pancreatic cancer. We have developed QSAR models for predicting promiscuous inhibitors using the pharmacological data. Our models achieved maximum Pearson correlation coefficient of 0.86, when evaluated on 10-fold cross-validation. Our models have also successfully validated the drug-to-oncogene relationship and further we used these models to screen FDA approved drugs and tested them in vitro. We have integrated these models in a webserver named as DiPCell, which will be useful for screening and designing novel promiscuous drug molecules. We have also identified the most and least effective drugs for pancreatic cancer cell lines. On the other side, we have identified resistant pancreatic cancer cell lines, which need investigative scanner on them to put light on resistant mechanism in pancreatic cancer. |
format | Online Article Text |
id | pubmed-3985076 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2014 |
publisher | Nature Publishing Group |
record_format | MEDLINE/PubMed |
spelling | pubmed-39850762014-04-18 Designing of promiscuous inhibitors against pancreatic cancer cell lines Kumar, Rahul Chaudhary, Kumardeep Singla, Deepak Gautam, Ankur Raghava, Gajendra P. S. Sci Rep Article Pancreatic cancer remains the most devastating disease with worst prognosis. There is a pressing need to accelerate the drug discovery process to identify new effective drug candidates against pancreatic cancer. We have developed QSAR models for predicting promiscuous inhibitors using the pharmacological data. Our models achieved maximum Pearson correlation coefficient of 0.86, when evaluated on 10-fold cross-validation. Our models have also successfully validated the drug-to-oncogene relationship and further we used these models to screen FDA approved drugs and tested them in vitro. We have integrated these models in a webserver named as DiPCell, which will be useful for screening and designing novel promiscuous drug molecules. We have also identified the most and least effective drugs for pancreatic cancer cell lines. On the other side, we have identified resistant pancreatic cancer cell lines, which need investigative scanner on them to put light on resistant mechanism in pancreatic cancer. Nature Publishing Group 2014-04-14 /pmc/articles/PMC3985076/ /pubmed/24728108 http://dx.doi.org/10.1038/srep04668 Text en Copyright © 2014, Macmillan Publishers Limited. All rights reserved http://creativecommons.org/licenses/by-nc-sa/3.0/ This work is licensed under a Creative Commons Attribution-NonCommercial-ShareAlike 3.0 Unported License. The images in this article are included in the article's Creative Commons license, unless indicated otherwise in the image credit; if the image is not included under the Creative Commons license, users will need to obtain permission from the license holder in order to reproduce the image. To view a copy of this license, visit http://creativecommons.org/licenses/by-nc-sa/3.0/ |
spellingShingle | Article Kumar, Rahul Chaudhary, Kumardeep Singla, Deepak Gautam, Ankur Raghava, Gajendra P. S. Designing of promiscuous inhibitors against pancreatic cancer cell lines |
title | Designing of promiscuous inhibitors against pancreatic cancer cell lines |
title_full | Designing of promiscuous inhibitors against pancreatic cancer cell lines |
title_fullStr | Designing of promiscuous inhibitors against pancreatic cancer cell lines |
title_full_unstemmed | Designing of promiscuous inhibitors against pancreatic cancer cell lines |
title_short | Designing of promiscuous inhibitors against pancreatic cancer cell lines |
title_sort | designing of promiscuous inhibitors against pancreatic cancer cell lines |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3985076/ https://www.ncbi.nlm.nih.gov/pubmed/24728108 http://dx.doi.org/10.1038/srep04668 |
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