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The RSC chromatin remodeling complex has a crucial role in the complete remodeler set for yeast PHO5 promoter opening

Although yeast PHO5 promoter chromatin opening is a founding model for chromatin remodeling, the complete set of involved remodelers remained unknown for a long time. The SWI/SNF and INO80 remodelers cooperate here, but nonessentially, and none of the many tested single or combined remodeler gene mu...

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Autores principales: Musladin, Sanja, Krietenstein, Nils, Korber, Philipp, Barbaric, Slobodan
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Oxford University Press 2014
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3985623/
https://www.ncbi.nlm.nih.gov/pubmed/24465003
http://dx.doi.org/10.1093/nar/gkt1395
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author Musladin, Sanja
Krietenstein, Nils
Korber, Philipp
Barbaric, Slobodan
author_facet Musladin, Sanja
Krietenstein, Nils
Korber, Philipp
Barbaric, Slobodan
author_sort Musladin, Sanja
collection PubMed
description Although yeast PHO5 promoter chromatin opening is a founding model for chromatin remodeling, the complete set of involved remodelers remained unknown for a long time. The SWI/SNF and INO80 remodelers cooperate here, but nonessentially, and none of the many tested single or combined remodeler gene mutations could prevent PHO5 promoter opening. RSC, the most abundant and only remodeler essential for viability, was a controversial candidate for the unrecognized remodeling activity but unassessed in vivo. Now we show that remodels the structure of chromatin (RSC) is crucially involved in PHO5 promoter opening. Further, the isw1 chd1 double deletion also delayed chromatin remodeling. Strikingly, combined absence of RSC and Isw1/Chd1 or Snf2 abolished for the first time promoter opening on otherwise sufficient induction in vivo. Together with previous findings, we recognize now a surprisingly complex network of five remodelers (RSC, SWI/SNF, INO80, Isw1 and Chd1) from four subfamilies (SWI/SNF, INO80, ISWI and CHD) as involved in PHO5 promoter chromatin remodeling. This is likely the first described complete remodeler set for a physiological chromatin transition. RSC was hardly involved at the coregulated PHO8 or PHO84 promoters despite cofactor recruitment by the same transactivator and RSC’s presence at all three promoters. Therefore, promoter-specific chromatin rather than transactivators determine remodeler requirements.
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spelling pubmed-39856232014-04-18 The RSC chromatin remodeling complex has a crucial role in the complete remodeler set for yeast PHO5 promoter opening Musladin, Sanja Krietenstein, Nils Korber, Philipp Barbaric, Slobodan Nucleic Acids Res Gene Regulation, Chromatin and Epigenetics Although yeast PHO5 promoter chromatin opening is a founding model for chromatin remodeling, the complete set of involved remodelers remained unknown for a long time. The SWI/SNF and INO80 remodelers cooperate here, but nonessentially, and none of the many tested single or combined remodeler gene mutations could prevent PHO5 promoter opening. RSC, the most abundant and only remodeler essential for viability, was a controversial candidate for the unrecognized remodeling activity but unassessed in vivo. Now we show that remodels the structure of chromatin (RSC) is crucially involved in PHO5 promoter opening. Further, the isw1 chd1 double deletion also delayed chromatin remodeling. Strikingly, combined absence of RSC and Isw1/Chd1 or Snf2 abolished for the first time promoter opening on otherwise sufficient induction in vivo. Together with previous findings, we recognize now a surprisingly complex network of five remodelers (RSC, SWI/SNF, INO80, Isw1 and Chd1) from four subfamilies (SWI/SNF, INO80, ISWI and CHD) as involved in PHO5 promoter chromatin remodeling. This is likely the first described complete remodeler set for a physiological chromatin transition. RSC was hardly involved at the coregulated PHO8 or PHO84 promoters despite cofactor recruitment by the same transactivator and RSC’s presence at all three promoters. Therefore, promoter-specific chromatin rather than transactivators determine remodeler requirements. Oxford University Press 2014-04 2014-01-24 /pmc/articles/PMC3985623/ /pubmed/24465003 http://dx.doi.org/10.1093/nar/gkt1395 Text en © The Author(s) 2014. Published by Oxford University Press. http://creativecommons.org/licenses/by-nc/3.0/ This is an Open Access article distributed under the terms of the Creative Commons Attribution Non-Commercial License (http://creativecommons.org/licenses/by-nc/3.0/), which permits non-commercial re-use, distribution, and reproduction in any medium, provided the original work is properly cited. For commercial re-use, please contact journals.permissions@oup.com
spellingShingle Gene Regulation, Chromatin and Epigenetics
Musladin, Sanja
Krietenstein, Nils
Korber, Philipp
Barbaric, Slobodan
The RSC chromatin remodeling complex has a crucial role in the complete remodeler set for yeast PHO5 promoter opening
title The RSC chromatin remodeling complex has a crucial role in the complete remodeler set for yeast PHO5 promoter opening
title_full The RSC chromatin remodeling complex has a crucial role in the complete remodeler set for yeast PHO5 promoter opening
title_fullStr The RSC chromatin remodeling complex has a crucial role in the complete remodeler set for yeast PHO5 promoter opening
title_full_unstemmed The RSC chromatin remodeling complex has a crucial role in the complete remodeler set for yeast PHO5 promoter opening
title_short The RSC chromatin remodeling complex has a crucial role in the complete remodeler set for yeast PHO5 promoter opening
title_sort rsc chromatin remodeling complex has a crucial role in the complete remodeler set for yeast pho5 promoter opening
topic Gene Regulation, Chromatin and Epigenetics
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3985623/
https://www.ncbi.nlm.nih.gov/pubmed/24465003
http://dx.doi.org/10.1093/nar/gkt1395
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