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Why network approach can promote a new way of thinking in biology
This work deals with the particular nature of network-based approach in biology. We will comment about the shift from the consideration of the molecular layer as the definitive place where causative process start to the elucidation of the among elements (at any level of biological organization they...
Autores principales: | , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Frontiers Media S.A.
2014
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Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3986556/ https://www.ncbi.nlm.nih.gov/pubmed/24782892 http://dx.doi.org/10.3389/fgene.2014.00083 |
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author | Giuliani, Alessandro Filippi, Simonetta Bertolaso, Marta |
author_facet | Giuliani, Alessandro Filippi, Simonetta Bertolaso, Marta |
author_sort | Giuliani, Alessandro |
collection | PubMed |
description | This work deals with the particular nature of network-based approach in biology. We will comment about the shift from the consideration of the molecular layer as the definitive place where causative process start to the elucidation of the among elements (at any level of biological organization they are located) interaction network as the main goal of scientific explanation. This shift comes from the intrinsic nature of networks where the properties of a specific node are determined by its position in the entire network (top-down explanation) while the global network characteristics emerge from the nodes wiring pattern (bottom-up explanation). This promotes a “middle-out” paradigm formally identical to the time honored chemical thought holding big promises in the study of biological regulation. |
format | Online Article Text |
id | pubmed-3986556 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2014 |
publisher | Frontiers Media S.A. |
record_format | MEDLINE/PubMed |
spelling | pubmed-39865562014-04-29 Why network approach can promote a new way of thinking in biology Giuliani, Alessandro Filippi, Simonetta Bertolaso, Marta Front Genet Physiology This work deals with the particular nature of network-based approach in biology. We will comment about the shift from the consideration of the molecular layer as the definitive place where causative process start to the elucidation of the among elements (at any level of biological organization they are located) interaction network as the main goal of scientific explanation. This shift comes from the intrinsic nature of networks where the properties of a specific node are determined by its position in the entire network (top-down explanation) while the global network characteristics emerge from the nodes wiring pattern (bottom-up explanation). This promotes a “middle-out” paradigm formally identical to the time honored chemical thought holding big promises in the study of biological regulation. Frontiers Media S.A. 2014-04-08 /pmc/articles/PMC3986556/ /pubmed/24782892 http://dx.doi.org/10.3389/fgene.2014.00083 Text en Copyright © 2014 Giuliani, Filippi and Bertolaso. http://creativecommons.org/licenses/by/3.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) or licensor are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms. |
spellingShingle | Physiology Giuliani, Alessandro Filippi, Simonetta Bertolaso, Marta Why network approach can promote a new way of thinking in biology |
title | Why network approach can promote a new way of thinking in biology |
title_full | Why network approach can promote a new way of thinking in biology |
title_fullStr | Why network approach can promote a new way of thinking in biology |
title_full_unstemmed | Why network approach can promote a new way of thinking in biology |
title_short | Why network approach can promote a new way of thinking in biology |
title_sort | why network approach can promote a new way of thinking in biology |
topic | Physiology |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3986556/ https://www.ncbi.nlm.nih.gov/pubmed/24782892 http://dx.doi.org/10.3389/fgene.2014.00083 |
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