Cargando…

Comparison of transcriptional profiles of Clostridium thermocellum grown on cellobiose and pretreated yellow poplar using RNA-Seq

The anaerobic, thermophilic bacterium, Clostridium thermocellum, secretes multi-protein enzyme complexes, termed cellulosomes, which synergistically interact with the microbial cell surface and efficiently disassemble plant cell wall biomass. C. thermocellum has also been considered a potential cons...

Descripción completa

Detalles Bibliográficos
Autores principales:	Wei, Hui, Fu, Yan, Magnusson, Lauren, Baker, John O., Maness, Pin-Ching, Xu, Qi, Yang, Shihui, Bowersox, Andrew, Bogorad, Igor, Wang, Wei, Tucker, Melvin P., Himmel, Michael E., Ding, Shi-You
Formato:	Online Artículo Texto
Lenguaje:	English
Publicado:	Frontiers Media S.A. 2014
Materias:	Microbiology
Acceso en línea:	https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3990059/ https://www.ncbi.nlm.nih.gov/pubmed/24782837 http://dx.doi.org/10.3389/fmicb.2014.00142

Ejemplares similares

Transcriptomic analysis of a Clostridium thermocellum strain engineered to utilize xylose: responses to xylose versus cellobiose feeding
por: Tafur Rangel, Albert E., et al.
Publicado: (2020)

Broadening the Substrate Specificity of Cellobiose Phosphorylase from Clostridium thermocellum for Improved Transformation of Cellodextrin to Starch
por: Zhang, Yuanyuan, et al.
Publicado: (2023)

Composition and yield of non-cellulosic and cellulosic sugars in soluble and particulate fractions during consolidated bioprocessing of poplar biomass by Clostridium thermocellum
por: Biswal, Ajaya K., et al.
Publicado: (2022)

Isotope-Assisted Metabolite Analysis Sheds Light on Central Carbon Metabolism of a Model Cellulolytic Bacterium Clostridium thermocellum
por: Xiong, Wei, et al.
Publicado: (2018)

In situ micro-spectroscopic investigation of lignin in poplar cell walls pretreated by maleic acid
por: Zeng, Yining, et al.
Publicado: (2015)

Diauxic growth of Clostridium acetobutylicum ATCC 824 when grown on mixtures of glucose and cellobiose
por: Buendia-Kandia, Felipe, et al.
Publicado: (2018)

Biomass augmentation through thermochemical pretreatments greatly enhances digestion of switchgrass by Clostridium thermocellum
por: Kothari, Ninad, et al.
Publicado: (2018)

Analysis of strand-specific RNA-seq data using machine learning reveals the structures of transcription units in Clostridium thermocellum
por: Chou, Wen-Chi, et al.
Publicado: (2015)

Dramatic performance of Clostridium thermocellum explained by its wide range of cellulase modalities
por: Xu, Qi, et al.
Publicado: (2016)

Elimination of formate production in Clostridium thermocellum
por: Rydzak, Thomas, et al.
Publicado: (2015)

Clostridium thermocellum transcriptomic profiles after exposure to furfural or heat stress
por: Wilson, Charlotte M, et al.
Publicado: (2013)

Tracking the cellulolytic activity of Clostridium thermocellum biofilms
por: Dumitrache, Alexandru, et al.
Publicado: (2013)

Metabolic Adaption of Ethanol-Tolerant Clostridium thermocellum
por: Zhu, Xinshu, et al.
Publicado: (2013)

Identifying promoters for gene expression in Clostridium thermocellum
por: Olson, Daniel G., et al.
Publicado: (2015)

Deciphering Cellodextrin and Glucose Uptake in Clostridium thermocellum
por: Yan, Fei, et al.
Publicado: (2022)

Ethanol tolerance in engineered strains of Clostridium thermocellum
por: Olson, Daniel G., et al.
Publicado: (2023)

Comparative genomics reveals cellobiose hydrolysis mechanism of Ruminiclostridium thermocellum M3, a cellulosic saccharification bacterium
por: Tao, Sheng, et al.
Publicado: (2023)

Global transcriptome analysis of Clostridium thermocellum ATCC 27405 during growth on dilute acid pretreated Populus and switchgrass
por: Wilson, Charlotte M, et al.
Publicado: (2013)

Application of Long Sequence Reads To Improve Genomes for Clostridium thermocellum AD2, Clostridium thermocellum LQRI, and Pelosinus fermentans R7
por: Utturkar, Sagar M., et al.
Publicado: (2016)

Clostridium thermocellum ATCC27405 transcriptomic, metabolomic and proteomic profiles after ethanol stress
por: Yang, Shihui, et al.
Publicado: (2012)

Dcm methylation is detrimental to plasmid transformation in Clostridium thermocellum
por: Guss, Adam M, et al.
Publicado: (2012)

Role of Pectinolytic Enzymes Identified in Clostridium thermocellum Cellulosome
por: Chakraborty, Soumyadeep, et al.
Publicado: (2015)

Impact of Pretreated Switchgrass and Biomass Carbohydrates on Clostridium thermocellum ATCC 27405 Cellulosome Composition: A Quantitative Proteomic Analysis
por: Raman, Babu, et al.
Publicado: (2009)

Synergistic properties of cellulases from Clostridium cellulovorans in the presence of cellobiose
por: Yamamoto, Kosuke, et al.
Publicado: (2016)

Transcriptomic analysis of Clostridium thermocellum ATCC 27405 cellulose fermentation
por: Raman, Babu, et al.
Publicado: (2011)

Genome-scale metabolic analysis of Clostridium thermocellum for bioethanol production
por: Roberts, Seth B, et al.
Publicado: (2010)

Characterization of CRISPR RNA processing in Clostridium thermocellum and Methanococcus maripaludis
por: Richter, Hagen, et al.
Publicado: (2012)

Modeling and structural analysis of cellulases using Clostridium thermocellum as template
por: Kumar, Nathan Vinod, et al.
Publicado: (2012)

Clostridium thermocellum DSM 1313 transcriptional responses to redox perturbation
por: Sander, Kyle, et al.
Publicado: (2015)

Enhanced ethanol formation by Clostridium thermocellum via pyruvate decarboxylase
por: Tian, Liang, et al.
Publicado: (2017)

Expression of adhA from different organisms in Clostridium thermocellum
por: Zheng, Tianyong, et al.
Publicado: (2017)

Simultaneous achievement of high ethanol yield and titer in Clostridium thermocellum
por: Tian, Liang, et al.
Publicado: (2016)

Thermophilic whole‐cell degradation of polyethylene terephthalate using engineered Clostridium thermocellum
por: Yan, Fei, et al.
Publicado: (2020)

Efficient whole-cell-catalyzing cellulose saccharification using engineered Clostridium thermocellum
por: Zhang, Jie, et al.
Publicado: (2017)

Lignocellulosic saccharification by a newly isolated bacterium, Ruminiclostridium thermocellum M3 and cellular cellulase activities for high ratio of glucose to cellobiose
por: Sheng, Tao, et al.
Publicado: (2016)

The contribution of cellulosomal scaffoldins to cellulose hydrolysis by Clostridium thermocellum analyzed by using thermotargetrons
por: Hong, Wei, et al.
Publicado: (2014)

A Targetron System for Gene Targeting in Thermophiles and Its Application in Clostridium thermocellum
por: Mohr, Georg, et al.
Publicado: (2013)

One-step pretreatment of yellow poplar biomass using peracetic acid to enhance enzymatic digestibility
por: Lee, Hyeong Rae, et al.
Publicado: (2017)

Consolidated bioprocessing of transgenic switchgrass by an engineered and evolved Clostridium thermocellum strain
por: Yee, Kelsey L, et al.
Publicado: (2014)

The exometabolome of Clostridium thermocellum reveals overflow metabolism at high cellulose loading
por: Holwerda, Evert K, et al.
Publicado: (2014)

Cannot write session to /tmp/vufind_sessions/sess_t51fpjfofti1rj4aq400kgo6ml