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An objective approach to model reduction: Application to the Sirius wheat model()

An existing simulation model of wheat growth and development, Sirius, was evaluated through a systematic model reduction procedure. The model was automatically manipulated under software control to replace variables within the model structure with constants, individually and in combination. Predicti...

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Detalles Bibliográficos
Autores principales: Crout, N.M.J., Craigon, J., Cox, G.M., Jao, Y., Tarsitano, D., Wood, A.T.A., Semenov, M.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Elsevier Science Publishers B.V 2014
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3990433/
https://www.ncbi.nlm.nih.gov/pubmed/24895470
http://dx.doi.org/10.1016/j.agrformet.2014.01.010
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author Crout, N.M.J.
Craigon, J.
Cox, G.M.
Jao, Y.
Tarsitano, D.
Wood, A.T.A.
Semenov, M.
author_facet Crout, N.M.J.
Craigon, J.
Cox, G.M.
Jao, Y.
Tarsitano, D.
Wood, A.T.A.
Semenov, M.
author_sort Crout, N.M.J.
collection PubMed
description An existing simulation model of wheat growth and development, Sirius, was evaluated through a systematic model reduction procedure. The model was automatically manipulated under software control to replace variables within the model structure with constants, individually and in combination. Predictions of the resultant models were compared to growth analysis observations of total biomass, grain yield, and canopy leaf area derived from 9 trials conducted in the UK and New Zealand under optimal, nitrogen limiting and drought conditions. Model performance in predicting these observations was compared in order to evaluate whether individual model variables contributed positively to the overall prediction. Of the 1 1 1 model variables considered 16 were identified as potentially redundant. Areas of the model where there was evidence of redundancy were: (a) translocation of biomass carbon to grain; (b) nitrogen physiology; (c) adjustment of air temperature for various modelled processes; (d) allowance for diurnal variation in temperature; (e) vernalisation (f) soil nitrogen mineralisation (g) soil surface evaporation. It is not suggested that these are not important processes in real crops, rather, that their representation in the model cannot be justified in the context of the analysis. The approach described is analogous to a detailed model inter-comparison although it would be better described as a model intra-comparison as it is based on the comparison of many simplified forms of the same model. The approach provides automation to increase the efficiency of the evaluation and a systematic means of increasing the rigour of the evaluation.
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spelling pubmed-39904332014-06-01 An objective approach to model reduction: Application to the Sirius wheat model() Crout, N.M.J. Craigon, J. Cox, G.M. Jao, Y. Tarsitano, D. Wood, A.T.A. Semenov, M. Agric For Meteorol Article An existing simulation model of wheat growth and development, Sirius, was evaluated through a systematic model reduction procedure. The model was automatically manipulated under software control to replace variables within the model structure with constants, individually and in combination. Predictions of the resultant models were compared to growth analysis observations of total biomass, grain yield, and canopy leaf area derived from 9 trials conducted in the UK and New Zealand under optimal, nitrogen limiting and drought conditions. Model performance in predicting these observations was compared in order to evaluate whether individual model variables contributed positively to the overall prediction. Of the 1 1 1 model variables considered 16 were identified as potentially redundant. Areas of the model where there was evidence of redundancy were: (a) translocation of biomass carbon to grain; (b) nitrogen physiology; (c) adjustment of air temperature for various modelled processes; (d) allowance for diurnal variation in temperature; (e) vernalisation (f) soil nitrogen mineralisation (g) soil surface evaporation. It is not suggested that these are not important processes in real crops, rather, that their representation in the model cannot be justified in the context of the analysis. The approach described is analogous to a detailed model inter-comparison although it would be better described as a model intra-comparison as it is based on the comparison of many simplified forms of the same model. The approach provides automation to increase the efficiency of the evaluation and a systematic means of increasing the rigour of the evaluation. Elsevier Science Publishers B.V 2014-06-01 /pmc/articles/PMC3990433/ /pubmed/24895470 http://dx.doi.org/10.1016/j.agrformet.2014.01.010 Text en © 2014 The Authors http://creativecommons.org/licenses/by/3.0/ This is an open access article under the CC BY license (http://creativecommons.org/licenses/by/3.0/).
spellingShingle Article
Crout, N.M.J.
Craigon, J.
Cox, G.M.
Jao, Y.
Tarsitano, D.
Wood, A.T.A.
Semenov, M.
An objective approach to model reduction: Application to the Sirius wheat model()
title An objective approach to model reduction: Application to the Sirius wheat model()
title_full An objective approach to model reduction: Application to the Sirius wheat model()
title_fullStr An objective approach to model reduction: Application to the Sirius wheat model()
title_full_unstemmed An objective approach to model reduction: Application to the Sirius wheat model()
title_short An objective approach to model reduction: Application to the Sirius wheat model()
title_sort objective approach to model reduction: application to the sirius wheat model()
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3990433/
https://www.ncbi.nlm.nih.gov/pubmed/24895470
http://dx.doi.org/10.1016/j.agrformet.2014.01.010
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