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A Novel CAD System for Mitosis detection Using Histopathology Slide Images
Histopathology slides are one of the most applicable resources for pathology studies. As observation of these kinds of slides even by skillful pathologists is a tedious and time-consuming activity, computerizing this procedure aids the experts to have faster analysis with more case studies per day....
Autores principales: | , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Medknow Publications & Media Pvt Ltd
2014
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3994718/ https://www.ncbi.nlm.nih.gov/pubmed/24761378 |
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author | Tashk, Ashkan Helfroush, Mohammad Sadegh Danyali, Habibollah Akbarzadeh, Mojgan |
author_facet | Tashk, Ashkan Helfroush, Mohammad Sadegh Danyali, Habibollah Akbarzadeh, Mojgan |
author_sort | Tashk, Ashkan |
collection | PubMed |
description | Histopathology slides are one of the most applicable resources for pathology studies. As observation of these kinds of slides even by skillful pathologists is a tedious and time-consuming activity, computerizing this procedure aids the experts to have faster analysis with more case studies per day. In this paper, an automatic mitosis detection system (AMDS) for breast cancer histopathological slide images is proposed. In the proposed AMDS, the general phases of an automatic image based analyzer are considered and in each phase, some special innovations are employed. In the pre-processing step to segment the input digital histopathology images more precisely, 2D anisotropic diffusion filters are applied to them. In the training segmentation phase, the histopathological slide images are segmented based on RGB contents of their pixels using maximum likelihood estimation. Then, the mitosis and non-mitosis candidates are processed and hence that their completed local binary patterns are extracted object-wise. For the classification phase, two subsequently non-linear support vector machine classifiers are trained pixel-wise and object-wise, respectively. For the evaluation of the proposed AMDS, some object and region based measures are employed. Having computed the evaluation criteria, our proposed method performs more efficient according to f-measure metric (70.94% for Aperio XT scanner images and 70.11% for Hamamatsu images) than the methods proposed by other participants at Mitos-ICPR2012 contest in breast cancer histopathological images. The experimental results show the higher performance of the proposed AMDS compared with other competitive systems proposed in Mitos-ICPR2012 contest. |
format | Online Article Text |
id | pubmed-3994718 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2014 |
publisher | Medknow Publications & Media Pvt Ltd |
record_format | MEDLINE/PubMed |
spelling | pubmed-39947182014-04-23 A Novel CAD System for Mitosis detection Using Histopathology Slide Images Tashk, Ashkan Helfroush, Mohammad Sadegh Danyali, Habibollah Akbarzadeh, Mojgan J Med Signals Sens Original Article Histopathology slides are one of the most applicable resources for pathology studies. As observation of these kinds of slides even by skillful pathologists is a tedious and time-consuming activity, computerizing this procedure aids the experts to have faster analysis with more case studies per day. In this paper, an automatic mitosis detection system (AMDS) for breast cancer histopathological slide images is proposed. In the proposed AMDS, the general phases of an automatic image based analyzer are considered and in each phase, some special innovations are employed. In the pre-processing step to segment the input digital histopathology images more precisely, 2D anisotropic diffusion filters are applied to them. In the training segmentation phase, the histopathological slide images are segmented based on RGB contents of their pixels using maximum likelihood estimation. Then, the mitosis and non-mitosis candidates are processed and hence that their completed local binary patterns are extracted object-wise. For the classification phase, two subsequently non-linear support vector machine classifiers are trained pixel-wise and object-wise, respectively. For the evaluation of the proposed AMDS, some object and region based measures are employed. Having computed the evaluation criteria, our proposed method performs more efficient according to f-measure metric (70.94% for Aperio XT scanner images and 70.11% for Hamamatsu images) than the methods proposed by other participants at Mitos-ICPR2012 contest in breast cancer histopathological images. The experimental results show the higher performance of the proposed AMDS compared with other competitive systems proposed in Mitos-ICPR2012 contest. Medknow Publications & Media Pvt Ltd 2014 /pmc/articles/PMC3994718/ /pubmed/24761378 Text en Copyright: © Journal of Medical Signals and Sensors http://creativecommons.org/licenses/by-nc-sa/3.0 This is an open-access article distributed under the terms of the Creative Commons Attribution-Noncommercial-Share Alike 3.0 Unported, which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Original Article Tashk, Ashkan Helfroush, Mohammad Sadegh Danyali, Habibollah Akbarzadeh, Mojgan A Novel CAD System for Mitosis detection Using Histopathology Slide Images |
title | A Novel CAD System for Mitosis detection Using Histopathology Slide Images |
title_full | A Novel CAD System for Mitosis detection Using Histopathology Slide Images |
title_fullStr | A Novel CAD System for Mitosis detection Using Histopathology Slide Images |
title_full_unstemmed | A Novel CAD System for Mitosis detection Using Histopathology Slide Images |
title_short | A Novel CAD System for Mitosis detection Using Histopathology Slide Images |
title_sort | novel cad system for mitosis detection using histopathology slide images |
topic | Original Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3994718/ https://www.ncbi.nlm.nih.gov/pubmed/24761378 |
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