Cargando…

A Novel CAD System for Mitosis detection Using Histopathology Slide Images

Histopathology slides are one of the most applicable resources for pathology studies. As observation of these kinds of slides even by skillful pathologists is a tedious and time-consuming activity, computerizing this procedure aids the experts to have faster analysis with more case studies per day....

Descripción completa

Detalles Bibliográficos
Autores principales: Tashk, Ashkan, Helfroush, Mohammad Sadegh, Danyali, Habibollah, Akbarzadeh, Mojgan
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Medknow Publications & Media Pvt Ltd 2014
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3994718/
https://www.ncbi.nlm.nih.gov/pubmed/24761378
_version_ 1782312780942016512
author Tashk, Ashkan
Helfroush, Mohammad Sadegh
Danyali, Habibollah
Akbarzadeh, Mojgan
author_facet Tashk, Ashkan
Helfroush, Mohammad Sadegh
Danyali, Habibollah
Akbarzadeh, Mojgan
author_sort Tashk, Ashkan
collection PubMed
description Histopathology slides are one of the most applicable resources for pathology studies. As observation of these kinds of slides even by skillful pathologists is a tedious and time-consuming activity, computerizing this procedure aids the experts to have faster analysis with more case studies per day. In this paper, an automatic mitosis detection system (AMDS) for breast cancer histopathological slide images is proposed. In the proposed AMDS, the general phases of an automatic image based analyzer are considered and in each phase, some special innovations are employed. In the pre-processing step to segment the input digital histopathology images more precisely, 2D anisotropic diffusion filters are applied to them. In the training segmentation phase, the histopathological slide images are segmented based on RGB contents of their pixels using maximum likelihood estimation. Then, the mitosis and non-mitosis candidates are processed and hence that their completed local binary patterns are extracted object-wise. For the classification phase, two subsequently non-linear support vector machine classifiers are trained pixel-wise and object-wise, respectively. For the evaluation of the proposed AMDS, some object and region based measures are employed. Having computed the evaluation criteria, our proposed method performs more efficient according to f-measure metric (70.94% for Aperio XT scanner images and 70.11% for Hamamatsu images) than the methods proposed by other participants at Mitos-ICPR2012 contest in breast cancer histopathological images. The experimental results show the higher performance of the proposed AMDS compared with other competitive systems proposed in Mitos-ICPR2012 contest.
format Online
Article
Text
id pubmed-3994718
institution National Center for Biotechnology Information
language English
publishDate 2014
publisher Medknow Publications & Media Pvt Ltd
record_format MEDLINE/PubMed
spelling pubmed-39947182014-04-23 A Novel CAD System for Mitosis detection Using Histopathology Slide Images Tashk, Ashkan Helfroush, Mohammad Sadegh Danyali, Habibollah Akbarzadeh, Mojgan J Med Signals Sens Original Article Histopathology slides are one of the most applicable resources for pathology studies. As observation of these kinds of slides even by skillful pathologists is a tedious and time-consuming activity, computerizing this procedure aids the experts to have faster analysis with more case studies per day. In this paper, an automatic mitosis detection system (AMDS) for breast cancer histopathological slide images is proposed. In the proposed AMDS, the general phases of an automatic image based analyzer are considered and in each phase, some special innovations are employed. In the pre-processing step to segment the input digital histopathology images more precisely, 2D anisotropic diffusion filters are applied to them. In the training segmentation phase, the histopathological slide images are segmented based on RGB contents of their pixels using maximum likelihood estimation. Then, the mitosis and non-mitosis candidates are processed and hence that their completed local binary patterns are extracted object-wise. For the classification phase, two subsequently non-linear support vector machine classifiers are trained pixel-wise and object-wise, respectively. For the evaluation of the proposed AMDS, some object and region based measures are employed. Having computed the evaluation criteria, our proposed method performs more efficient according to f-measure metric (70.94% for Aperio XT scanner images and 70.11% for Hamamatsu images) than the methods proposed by other participants at Mitos-ICPR2012 contest in breast cancer histopathological images. The experimental results show the higher performance of the proposed AMDS compared with other competitive systems proposed in Mitos-ICPR2012 contest. Medknow Publications & Media Pvt Ltd 2014 /pmc/articles/PMC3994718/ /pubmed/24761378 Text en Copyright: © Journal of Medical Signals and Sensors http://creativecommons.org/licenses/by-nc-sa/3.0 This is an open-access article distributed under the terms of the Creative Commons Attribution-Noncommercial-Share Alike 3.0 Unported, which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Original Article
Tashk, Ashkan
Helfroush, Mohammad Sadegh
Danyali, Habibollah
Akbarzadeh, Mojgan
A Novel CAD System for Mitosis detection Using Histopathology Slide Images
title A Novel CAD System for Mitosis detection Using Histopathology Slide Images
title_full A Novel CAD System for Mitosis detection Using Histopathology Slide Images
title_fullStr A Novel CAD System for Mitosis detection Using Histopathology Slide Images
title_full_unstemmed A Novel CAD System for Mitosis detection Using Histopathology Slide Images
title_short A Novel CAD System for Mitosis detection Using Histopathology Slide Images
title_sort novel cad system for mitosis detection using histopathology slide images
topic Original Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3994718/
https://www.ncbi.nlm.nih.gov/pubmed/24761378
work_keys_str_mv AT tashkashkan anovelcadsystemformitosisdetectionusinghistopathologyslideimages
AT helfroushmohammadsadegh anovelcadsystemformitosisdetectionusinghistopathologyslideimages
AT danyalihabibollah anovelcadsystemformitosisdetectionusinghistopathologyslideimages
AT akbarzadehmojgan anovelcadsystemformitosisdetectionusinghistopathologyslideimages
AT tashkashkan novelcadsystemformitosisdetectionusinghistopathologyslideimages
AT helfroushmohammadsadegh novelcadsystemformitosisdetectionusinghistopathologyslideimages
AT danyalihabibollah novelcadsystemformitosisdetectionusinghistopathologyslideimages
AT akbarzadehmojgan novelcadsystemformitosisdetectionusinghistopathologyslideimages