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Molecular genotyping of ABO blood groups in some population groups from India

BACKGROUND & OBJECTIVES: Indian population is characterized by the presence of various castes and tribal groups. Various genetic polymorphisms have been used to differentiate among these groups. Amongst these, the ABO blood group system has been extensively studied. There is no information on mo...

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Autores principales: Ray, Sabita, Gorakshakar, Ajit C., Vasantha, K., Nadkarni, Anita, Italia, Yazdi, Ghosh, Kanjaksha
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Medknow Publications & Media Pvt Ltd 2014
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3994725/
https://www.ncbi.nlm.nih.gov/pubmed/24604045
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author Ray, Sabita
Gorakshakar, Ajit C.
Vasantha, K.
Nadkarni, Anita
Italia, Yazdi
Ghosh, Kanjaksha
author_facet Ray, Sabita
Gorakshakar, Ajit C.
Vasantha, K.
Nadkarni, Anita
Italia, Yazdi
Ghosh, Kanjaksha
author_sort Ray, Sabita
collection PubMed
description BACKGROUND & OBJECTIVES: Indian population is characterized by the presence of various castes and tribal groups. Various genetic polymorphisms have been used to differentiate among these groups. Amongst these, the ABO blood group system has been extensively studied. There is no information on molecular genotyping of ABO blood groups from India. Therefore, the main objective of this study was to characterize the common A, B and O alleles by molecular analysis in some Indian population groups. METHODS: One hundred samples from the mixed population from Mumbai, 101 samples from the Dhodia tribe and 100 samples from the Parsi community were included in this study. Initially, the samples were phenotyped by standard serologic techniques. PCR followed by single strand conformational polymorphsim (SSCP) was used for molecular ABO genotyping. Samples showing atypical SSCP patterns were further analysed by DNA sequencing to characterize rare alleles. RESULTS: Seven common ABO alleles with 19 different genotypes were found in the mixed population. The Dhodias showed 12 different ABO genotypes and the Parsis revealed 15 different ABO genotypes with six common ABO alleles identified in each of them. Two rare alleles were also identified. INTERPRETATION & CONCLUSIONS: This study reports the distribution of molecular genotypes of ABO alleles among some population groups from India. Considering the extremely heterogeneous nature of the Indian population, in terms of various genotype markers like blood groups, red cell enzymes, etc., many more ABO alleles are likely to be encountered.
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spelling pubmed-39947252014-04-23 Molecular genotyping of ABO blood groups in some population groups from India Ray, Sabita Gorakshakar, Ajit C. Vasantha, K. Nadkarni, Anita Italia, Yazdi Ghosh, Kanjaksha Indian J Med Res Original Article BACKGROUND & OBJECTIVES: Indian population is characterized by the presence of various castes and tribal groups. Various genetic polymorphisms have been used to differentiate among these groups. Amongst these, the ABO blood group system has been extensively studied. There is no information on molecular genotyping of ABO blood groups from India. Therefore, the main objective of this study was to characterize the common A, B and O alleles by molecular analysis in some Indian population groups. METHODS: One hundred samples from the mixed population from Mumbai, 101 samples from the Dhodia tribe and 100 samples from the Parsi community were included in this study. Initially, the samples were phenotyped by standard serologic techniques. PCR followed by single strand conformational polymorphsim (SSCP) was used for molecular ABO genotyping. Samples showing atypical SSCP patterns were further analysed by DNA sequencing to characterize rare alleles. RESULTS: Seven common ABO alleles with 19 different genotypes were found in the mixed population. The Dhodias showed 12 different ABO genotypes and the Parsis revealed 15 different ABO genotypes with six common ABO alleles identified in each of them. Two rare alleles were also identified. INTERPRETATION & CONCLUSIONS: This study reports the distribution of molecular genotypes of ABO alleles among some population groups from India. Considering the extremely heterogeneous nature of the Indian population, in terms of various genotype markers like blood groups, red cell enzymes, etc., many more ABO alleles are likely to be encountered. Medknow Publications & Media Pvt Ltd 2014-01 /pmc/articles/PMC3994725/ /pubmed/24604045 Text en Copyright: © Indian Journal of Medical Research http://creativecommons.org/licenses/by-nc-sa/3.0 This is an open-access article distributed under the terms of the Creative Commons Attribution-Noncommercial-Share Alike 3.0 Unported, which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Original Article
Ray, Sabita
Gorakshakar, Ajit C.
Vasantha, K.
Nadkarni, Anita
Italia, Yazdi
Ghosh, Kanjaksha
Molecular genotyping of ABO blood groups in some population groups from India
title Molecular genotyping of ABO blood groups in some population groups from India
title_full Molecular genotyping of ABO blood groups in some population groups from India
title_fullStr Molecular genotyping of ABO blood groups in some population groups from India
title_full_unstemmed Molecular genotyping of ABO blood groups in some population groups from India
title_short Molecular genotyping of ABO blood groups in some population groups from India
title_sort molecular genotyping of abo blood groups in some population groups from india
topic Original Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3994725/
https://www.ncbi.nlm.nih.gov/pubmed/24604045
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