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Novel skin phenotypes revealed by a genome-wide mouse reverse genetic screen
Permanent stop-and-shop large-scale mouse mutant resources provide an excellent platform to decipher tissue phenogenomics. Here we analyse skin from 538 knockout mouse mutants generated by the Sanger Institute Mouse Genetics Project. We optimize immunolabelling of tail epidermal wholemounts to allow...
Autores principales: | , , , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Nature Pub. Group
2014
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3996542/ https://www.ncbi.nlm.nih.gov/pubmed/24721909 http://dx.doi.org/10.1038/ncomms4540 |
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author | Liakath-Ali, Kifayathullah Vancollie, Valerie E. Heath, Emma Smedley, Damian P. Estabel, Jeanne Sunter, David DiTommaso, Tia White, Jacqueline K. Ramirez-Solis, Ramiro Smyth, Ian Steel, Karen P. Watt, Fiona M. |
author_facet | Liakath-Ali, Kifayathullah Vancollie, Valerie E. Heath, Emma Smedley, Damian P. Estabel, Jeanne Sunter, David DiTommaso, Tia White, Jacqueline K. Ramirez-Solis, Ramiro Smyth, Ian Steel, Karen P. Watt, Fiona M. |
author_sort | Liakath-Ali, Kifayathullah |
collection | PubMed |
description | Permanent stop-and-shop large-scale mouse mutant resources provide an excellent platform to decipher tissue phenogenomics. Here we analyse skin from 538 knockout mouse mutants generated by the Sanger Institute Mouse Genetics Project. We optimize immunolabelling of tail epidermal wholemounts to allow systematic annotation of hair follicle, sebaceous gland and interfollicular epidermal abnormalities using ontology terms from the Mammalian Phenotype Ontology. Of the 50 mutants with an epidermal phenotype, 9 map to human genetic conditions with skin abnormalities. Some mutant genes are expressed in the skin, whereas others are not, indicating systemic effects. One phenotype is affected by diet and several are incompletely penetrant. In-depth analysis of three mutants, Krt76, Myo5a (a model of human Griscelli syndrome) and Mysm1, provides validation of the screen. Our study is the first large-scale genome-wide tissue phenotype screen from the International Knockout Mouse Consortium and provides an open access resource for the scientific community. |
format | Online Article Text |
id | pubmed-3996542 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2014 |
publisher | Nature Pub. Group |
record_format | MEDLINE/PubMed |
spelling | pubmed-39965422014-04-24 Novel skin phenotypes revealed by a genome-wide mouse reverse genetic screen Liakath-Ali, Kifayathullah Vancollie, Valerie E. Heath, Emma Smedley, Damian P. Estabel, Jeanne Sunter, David DiTommaso, Tia White, Jacqueline K. Ramirez-Solis, Ramiro Smyth, Ian Steel, Karen P. Watt, Fiona M. Nat Commun Article Permanent stop-and-shop large-scale mouse mutant resources provide an excellent platform to decipher tissue phenogenomics. Here we analyse skin from 538 knockout mouse mutants generated by the Sanger Institute Mouse Genetics Project. We optimize immunolabelling of tail epidermal wholemounts to allow systematic annotation of hair follicle, sebaceous gland and interfollicular epidermal abnormalities using ontology terms from the Mammalian Phenotype Ontology. Of the 50 mutants with an epidermal phenotype, 9 map to human genetic conditions with skin abnormalities. Some mutant genes are expressed in the skin, whereas others are not, indicating systemic effects. One phenotype is affected by diet and several are incompletely penetrant. In-depth analysis of three mutants, Krt76, Myo5a (a model of human Griscelli syndrome) and Mysm1, provides validation of the screen. Our study is the first large-scale genome-wide tissue phenotype screen from the International Knockout Mouse Consortium and provides an open access resource for the scientific community. Nature Pub. Group 2014-04-11 /pmc/articles/PMC3996542/ /pubmed/24721909 http://dx.doi.org/10.1038/ncomms4540 Text en Copyright © 2014, Nature Publishing Group, a division of Macmillan Publishers Limited. All Rights Reserved. http://creativecommons.org/licenses/by-nc-by/3.0/ This work is licensed under a Creative Commons Attribution 3.0 Unported License. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in the credit line; if the material is not included under the Creative Commons license, users will need to obtain permission from the license holder to reproduce the material. To view a copy of this license, visit http://creativecommons.org/licenses/by/3.0/ |
spellingShingle | Article Liakath-Ali, Kifayathullah Vancollie, Valerie E. Heath, Emma Smedley, Damian P. Estabel, Jeanne Sunter, David DiTommaso, Tia White, Jacqueline K. Ramirez-Solis, Ramiro Smyth, Ian Steel, Karen P. Watt, Fiona M. Novel skin phenotypes revealed by a genome-wide mouse reverse genetic screen |
title | Novel skin phenotypes revealed by a genome-wide mouse reverse genetic screen |
title_full | Novel skin phenotypes revealed by a genome-wide mouse reverse genetic screen |
title_fullStr | Novel skin phenotypes revealed by a genome-wide mouse reverse genetic screen |
title_full_unstemmed | Novel skin phenotypes revealed by a genome-wide mouse reverse genetic screen |
title_short | Novel skin phenotypes revealed by a genome-wide mouse reverse genetic screen |
title_sort | novel skin phenotypes revealed by a genome-wide mouse reverse genetic screen |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3996542/ https://www.ncbi.nlm.nih.gov/pubmed/24721909 http://dx.doi.org/10.1038/ncomms4540 |
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