Cargando…

Frequent Mutations in EGFR, KRAS and TP53 Genes in Human Lung Cancer Tumors Detected by Ion Torrent DNA Sequencing

Lung cancer is the most common malignancy and the leading cause of cancer deaths worldwide. While smoking is by far the leading cause of lung cancer, other environmental and genetic factors influence the development and progression of the cancer. Since unique mutations patterns have been observed in...

Descripción completa

Detalles Bibliográficos
Autores principales: Cai, Xin, Sheng, Jianhui, Tang, Chuanning, Nandakumar, Vijayalakshmi, Ye, Hua, Ji, Hong, Tang, Haiying, Qin, Yu, Guan, Hongwei, Lou, Feng, Zhang, Dandan, Sun, Hong, Dong, Haichao, Zhang, Guangchun, Liu, Zhiyuan, Dong, Zhishou, Guo, Baishuai, Yan, He, Yan, Chaowei, Wang, Lu, Su, Ziyi, Li, Yangyang, Jones, Lindsey, Huang, Xue F., Chen, Si-Yi, Wu, Taihua, Lin, Hongli
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Public Library of Science 2014
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3997391/
https://www.ncbi.nlm.nih.gov/pubmed/24760004
http://dx.doi.org/10.1371/journal.pone.0095228
_version_ 1782313183470419968
author Cai, Xin
Sheng, Jianhui
Tang, Chuanning
Nandakumar, Vijayalakshmi
Ye, Hua
Ji, Hong
Tang, Haiying
Qin, Yu
Guan, Hongwei
Lou, Feng
Zhang, Dandan
Sun, Hong
Dong, Haichao
Zhang, Guangchun
Liu, Zhiyuan
Dong, Zhishou
Guo, Baishuai
Yan, He
Yan, Chaowei
Wang, Lu
Su, Ziyi
Li, Yangyang
Jones, Lindsey
Huang, Xue F.
Chen, Si-Yi
Wu, Taihua
Lin, Hongli
author_facet Cai, Xin
Sheng, Jianhui
Tang, Chuanning
Nandakumar, Vijayalakshmi
Ye, Hua
Ji, Hong
Tang, Haiying
Qin, Yu
Guan, Hongwei
Lou, Feng
Zhang, Dandan
Sun, Hong
Dong, Haichao
Zhang, Guangchun
Liu, Zhiyuan
Dong, Zhishou
Guo, Baishuai
Yan, He
Yan, Chaowei
Wang, Lu
Su, Ziyi
Li, Yangyang
Jones, Lindsey
Huang, Xue F.
Chen, Si-Yi
Wu, Taihua
Lin, Hongli
author_sort Cai, Xin
collection PubMed
description Lung cancer is the most common malignancy and the leading cause of cancer deaths worldwide. While smoking is by far the leading cause of lung cancer, other environmental and genetic factors influence the development and progression of the cancer. Since unique mutations patterns have been observed in individual cancer samples, identification and characterization of the distinctive lung cancer molecular profile is essential for developing more effective, tailored therapies. Until recently, personalized DNA sequencing to identify genetic mutations in cancer was impractical and expensive. The recent technological advancements in next-generation DNA sequencing, such as the semiconductor-based Ion Torrent sequencing platform, has made DNA sequencing cost and time effective with more reliable results. Using the Ion Torrent Ampliseq Cancer Panel, we sequenced 737 loci from 45 cancer-related genes to identify genetic mutations in 76 human lung cancer samples. The sequencing analysis revealed missense mutations in KRAS, EGFR, and TP53 genes in the breast cancer samples of various histologic types. Thus, this study demonstrates the necessity of sequencing individual human cancers in order to develop personalized drugs or combination therapies to effectively target individual, breast cancer-specific mutations.
format Online
Article
Text
id pubmed-3997391
institution National Center for Biotechnology Information
language English
publishDate 2014
publisher Public Library of Science
record_format MEDLINE/PubMed
spelling pubmed-39973912014-04-29 Frequent Mutations in EGFR, KRAS and TP53 Genes in Human Lung Cancer Tumors Detected by Ion Torrent DNA Sequencing Cai, Xin Sheng, Jianhui Tang, Chuanning Nandakumar, Vijayalakshmi Ye, Hua Ji, Hong Tang, Haiying Qin, Yu Guan, Hongwei Lou, Feng Zhang, Dandan Sun, Hong Dong, Haichao Zhang, Guangchun Liu, Zhiyuan Dong, Zhishou Guo, Baishuai Yan, He Yan, Chaowei Wang, Lu Su, Ziyi Li, Yangyang Jones, Lindsey Huang, Xue F. Chen, Si-Yi Wu, Taihua Lin, Hongli PLoS One Research Article Lung cancer is the most common malignancy and the leading cause of cancer deaths worldwide. While smoking is by far the leading cause of lung cancer, other environmental and genetic factors influence the development and progression of the cancer. Since unique mutations patterns have been observed in individual cancer samples, identification and characterization of the distinctive lung cancer molecular profile is essential for developing more effective, tailored therapies. Until recently, personalized DNA sequencing to identify genetic mutations in cancer was impractical and expensive. The recent technological advancements in next-generation DNA sequencing, such as the semiconductor-based Ion Torrent sequencing platform, has made DNA sequencing cost and time effective with more reliable results. Using the Ion Torrent Ampliseq Cancer Panel, we sequenced 737 loci from 45 cancer-related genes to identify genetic mutations in 76 human lung cancer samples. The sequencing analysis revealed missense mutations in KRAS, EGFR, and TP53 genes in the breast cancer samples of various histologic types. Thus, this study demonstrates the necessity of sequencing individual human cancers in order to develop personalized drugs or combination therapies to effectively target individual, breast cancer-specific mutations. Public Library of Science 2014-04-23 /pmc/articles/PMC3997391/ /pubmed/24760004 http://dx.doi.org/10.1371/journal.pone.0095228 Text en © 2014 Cai et al http://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are properly credited.
spellingShingle Research Article
Cai, Xin
Sheng, Jianhui
Tang, Chuanning
Nandakumar, Vijayalakshmi
Ye, Hua
Ji, Hong
Tang, Haiying
Qin, Yu
Guan, Hongwei
Lou, Feng
Zhang, Dandan
Sun, Hong
Dong, Haichao
Zhang, Guangchun
Liu, Zhiyuan
Dong, Zhishou
Guo, Baishuai
Yan, He
Yan, Chaowei
Wang, Lu
Su, Ziyi
Li, Yangyang
Jones, Lindsey
Huang, Xue F.
Chen, Si-Yi
Wu, Taihua
Lin, Hongli
Frequent Mutations in EGFR, KRAS and TP53 Genes in Human Lung Cancer Tumors Detected by Ion Torrent DNA Sequencing
title Frequent Mutations in EGFR, KRAS and TP53 Genes in Human Lung Cancer Tumors Detected by Ion Torrent DNA Sequencing
title_full Frequent Mutations in EGFR, KRAS and TP53 Genes in Human Lung Cancer Tumors Detected by Ion Torrent DNA Sequencing
title_fullStr Frequent Mutations in EGFR, KRAS and TP53 Genes in Human Lung Cancer Tumors Detected by Ion Torrent DNA Sequencing
title_full_unstemmed Frequent Mutations in EGFR, KRAS and TP53 Genes in Human Lung Cancer Tumors Detected by Ion Torrent DNA Sequencing
title_short Frequent Mutations in EGFR, KRAS and TP53 Genes in Human Lung Cancer Tumors Detected by Ion Torrent DNA Sequencing
title_sort frequent mutations in egfr, kras and tp53 genes in human lung cancer tumors detected by ion torrent dna sequencing
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3997391/
https://www.ncbi.nlm.nih.gov/pubmed/24760004
http://dx.doi.org/10.1371/journal.pone.0095228
work_keys_str_mv AT caixin frequentmutationsinegfrkrasandtp53genesinhumanlungcancertumorsdetectedbyiontorrentdnasequencing
AT shengjianhui frequentmutationsinegfrkrasandtp53genesinhumanlungcancertumorsdetectedbyiontorrentdnasequencing
AT tangchuanning frequentmutationsinegfrkrasandtp53genesinhumanlungcancertumorsdetectedbyiontorrentdnasequencing
AT nandakumarvijayalakshmi frequentmutationsinegfrkrasandtp53genesinhumanlungcancertumorsdetectedbyiontorrentdnasequencing
AT yehua frequentmutationsinegfrkrasandtp53genesinhumanlungcancertumorsdetectedbyiontorrentdnasequencing
AT jihong frequentmutationsinegfrkrasandtp53genesinhumanlungcancertumorsdetectedbyiontorrentdnasequencing
AT tanghaiying frequentmutationsinegfrkrasandtp53genesinhumanlungcancertumorsdetectedbyiontorrentdnasequencing
AT qinyu frequentmutationsinegfrkrasandtp53genesinhumanlungcancertumorsdetectedbyiontorrentdnasequencing
AT guanhongwei frequentmutationsinegfrkrasandtp53genesinhumanlungcancertumorsdetectedbyiontorrentdnasequencing
AT loufeng frequentmutationsinegfrkrasandtp53genesinhumanlungcancertumorsdetectedbyiontorrentdnasequencing
AT zhangdandan frequentmutationsinegfrkrasandtp53genesinhumanlungcancertumorsdetectedbyiontorrentdnasequencing
AT sunhong frequentmutationsinegfrkrasandtp53genesinhumanlungcancertumorsdetectedbyiontorrentdnasequencing
AT donghaichao frequentmutationsinegfrkrasandtp53genesinhumanlungcancertumorsdetectedbyiontorrentdnasequencing
AT zhangguangchun frequentmutationsinegfrkrasandtp53genesinhumanlungcancertumorsdetectedbyiontorrentdnasequencing
AT liuzhiyuan frequentmutationsinegfrkrasandtp53genesinhumanlungcancertumorsdetectedbyiontorrentdnasequencing
AT dongzhishou frequentmutationsinegfrkrasandtp53genesinhumanlungcancertumorsdetectedbyiontorrentdnasequencing
AT guobaishuai frequentmutationsinegfrkrasandtp53genesinhumanlungcancertumorsdetectedbyiontorrentdnasequencing
AT yanhe frequentmutationsinegfrkrasandtp53genesinhumanlungcancertumorsdetectedbyiontorrentdnasequencing
AT yanchaowei frequentmutationsinegfrkrasandtp53genesinhumanlungcancertumorsdetectedbyiontorrentdnasequencing
AT wanglu frequentmutationsinegfrkrasandtp53genesinhumanlungcancertumorsdetectedbyiontorrentdnasequencing
AT suziyi frequentmutationsinegfrkrasandtp53genesinhumanlungcancertumorsdetectedbyiontorrentdnasequencing
AT liyangyang frequentmutationsinegfrkrasandtp53genesinhumanlungcancertumorsdetectedbyiontorrentdnasequencing
AT joneslindsey frequentmutationsinegfrkrasandtp53genesinhumanlungcancertumorsdetectedbyiontorrentdnasequencing
AT huangxuef frequentmutationsinegfrkrasandtp53genesinhumanlungcancertumorsdetectedbyiontorrentdnasequencing
AT chensiyi frequentmutationsinegfrkrasandtp53genesinhumanlungcancertumorsdetectedbyiontorrentdnasequencing
AT wutaihua frequentmutationsinegfrkrasandtp53genesinhumanlungcancertumorsdetectedbyiontorrentdnasequencing
AT linhongli frequentmutationsinegfrkrasandtp53genesinhumanlungcancertumorsdetectedbyiontorrentdnasequencing