Morpheus: a user-friendly modeling environment for multiscale and multicellular systems biology

Summary: Morpheus is a modeling environment for the simulation and integration of cell-based models with ordinary differential equations and reaction-diffusion systems. It allows rapid development of multiscale models in biological terms and mathematical expressions rather than programming code. Its...

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Autores principales: Starruß, Jörn, de Back, Walter, Brusch, Lutz, Deutsch, Andreas
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Oxford University Press 2014
Materias:
Applications Notes
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3998129/
https://www.ncbi.nlm.nih.gov/pubmed/24443380
http://dx.doi.org/10.1093/bioinformatics/btt772
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author Starruß, Jörn
de Back, Walter
Brusch, Lutz
Deutsch, Andreas
author_facet Starruß, Jörn
de Back, Walter
Brusch, Lutz
Deutsch, Andreas
author_sort Starruß, Jörn
collection PubMed
description Summary: Morpheus is a modeling environment for the simulation and integration of cell-based models with ordinary differential equations and reaction-diffusion systems. It allows rapid development of multiscale models in biological terms and mathematical expressions rather than programming code. Its graphical user interface supports the entire workflow from model construction and simulation to visualization, archiving and batch processing. Availability and implementation: Binary packages are available at http://imc.zih.tu-dresden.de/wiki/morpheus for Linux, Mac OSX and MS Windows. Contact: walter.deback@tu-dresden.de Supplementary information: Supplementary data are available at Bioinformatics online.
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spelling pubmed-39981292014-04-24 Morpheus: a user-friendly modeling environment for multiscale and multicellular systems biology Starruß, Jörn de Back, Walter Brusch, Lutz Deutsch, Andreas Bioinformatics Applications Notes Summary: Morpheus is a modeling environment for the simulation and integration of cell-based models with ordinary differential equations and reaction-diffusion systems. It allows rapid development of multiscale models in biological terms and mathematical expressions rather than programming code. Its graphical user interface supports the entire workflow from model construction and simulation to visualization, archiving and batch processing. Availability and implementation: Binary packages are available at http://imc.zih.tu-dresden.de/wiki/morpheus for Linux, Mac OSX and MS Windows. Contact: walter.deback@tu-dresden.de Supplementary information: Supplementary data are available at Bioinformatics online. Oxford University Press 2014-05-01 2014-01-17 /pmc/articles/PMC3998129/ /pubmed/24443380 http://dx.doi.org/10.1093/bioinformatics/btt772 Text en © The Author 2014. Published by Oxford University Press. http://creativecommons.org/licenses/by/3.0/ This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/3.0/), which permits unrestricted reuse, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Applications Notes
Starruß, Jörn
de Back, Walter
Brusch, Lutz
Deutsch, Andreas
Morpheus: a user-friendly modeling environment for multiscale and multicellular systems biology
title Morpheus: a user-friendly modeling environment for multiscale and multicellular systems biology
title_full Morpheus: a user-friendly modeling environment for multiscale and multicellular systems biology
title_fullStr Morpheus: a user-friendly modeling environment for multiscale and multicellular systems biology
title_full_unstemmed Morpheus: a user-friendly modeling environment for multiscale and multicellular systems biology
title_short Morpheus: a user-friendly modeling environment for multiscale and multicellular systems biology
title_sort morpheus: a user-friendly modeling environment for multiscale and multicellular systems biology
topic Applications Notes
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3998129/
https://www.ncbi.nlm.nih.gov/pubmed/24443380
http://dx.doi.org/10.1093/bioinformatics/btt772
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