Cargando…

The state of the art of odorant receptor deorphanization: A report from the orphanage

The odorant receptors (ORs) provide our main gateway to sensing the world of volatile chemicals. This involves a complex encoding process in which multiple ORs, each of which detects its own set of odorants, work as an ensemble to produce a distributed activation code that is presumably unique to ea...

Descripción completa

Detalles Bibliográficos
Autores principales: Peterlin, Zita, Firestein, Stuart, Rogers, Matthew E.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: The Rockefeller University Press 2014
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4003190/
https://www.ncbi.nlm.nih.gov/pubmed/24733839
http://dx.doi.org/10.1085/jgp.201311151
_version_ 1782313826094415872
author Peterlin, Zita
Firestein, Stuart
Rogers, Matthew E.
author_facet Peterlin, Zita
Firestein, Stuart
Rogers, Matthew E.
author_sort Peterlin, Zita
collection PubMed
description The odorant receptors (ORs) provide our main gateway to sensing the world of volatile chemicals. This involves a complex encoding process in which multiple ORs, each of which detects its own set of odorants, work as an ensemble to produce a distributed activation code that is presumably unique to each odorant. One marked challenge to decoding the olfactory code is OR deorphanization, the identification of a set of activating odorants for a particular receptor. Here, we survey various methods used to try to express defined ORs of interest. We also suggest strategies for selecting odorants for test panels to evaluate the functional expression of an OR. Integrating these tools, while retaining awareness of their idiosyncratic limitations, can provide a multi-tiered approach to OR deorphanization, spanning the initial discovery of a ligand to vetting that ligand in a physiologically relevant setting.
format Online
Article
Text
id pubmed-4003190
institution National Center for Biotechnology Information
language English
publishDate 2014
publisher The Rockefeller University Press
record_format MEDLINE/PubMed
spelling pubmed-40031902014-11-01 The state of the art of odorant receptor deorphanization: A report from the orphanage Peterlin, Zita Firestein, Stuart Rogers, Matthew E. J Gen Physiol Review The odorant receptors (ORs) provide our main gateway to sensing the world of volatile chemicals. This involves a complex encoding process in which multiple ORs, each of which detects its own set of odorants, work as an ensemble to produce a distributed activation code that is presumably unique to each odorant. One marked challenge to decoding the olfactory code is OR deorphanization, the identification of a set of activating odorants for a particular receptor. Here, we survey various methods used to try to express defined ORs of interest. We also suggest strategies for selecting odorants for test panels to evaluate the functional expression of an OR. Integrating these tools, while retaining awareness of their idiosyncratic limitations, can provide a multi-tiered approach to OR deorphanization, spanning the initial discovery of a ligand to vetting that ligand in a physiologically relevant setting. The Rockefeller University Press 2014-05 /pmc/articles/PMC4003190/ /pubmed/24733839 http://dx.doi.org/10.1085/jgp.201311151 Text en © 2014 Peterlin et al. This article is distributed under the terms of an Attribution–Noncommercial–Share Alike–No Mirror Sites license for the first six months after the publication date (see http://www.rupress.org/terms). After six months it is available under a Creative Commons License (Attribution–Noncommercial–Share Alike 3.0 Unported license, as described at http://creativecommons.org/licenses/by-nc-sa/3.0/).
spellingShingle Review
Peterlin, Zita
Firestein, Stuart
Rogers, Matthew E.
The state of the art of odorant receptor deorphanization: A report from the orphanage
title The state of the art of odorant receptor deorphanization: A report from the orphanage
title_full The state of the art of odorant receptor deorphanization: A report from the orphanage
title_fullStr The state of the art of odorant receptor deorphanization: A report from the orphanage
title_full_unstemmed The state of the art of odorant receptor deorphanization: A report from the orphanage
title_short The state of the art of odorant receptor deorphanization: A report from the orphanage
title_sort state of the art of odorant receptor deorphanization: a report from the orphanage
topic Review
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4003190/
https://www.ncbi.nlm.nih.gov/pubmed/24733839
http://dx.doi.org/10.1085/jgp.201311151
work_keys_str_mv AT peterlinzita thestateoftheartofodorantreceptordeorphanizationareportfromtheorphanage
AT firesteinstuart thestateoftheartofodorantreceptordeorphanizationareportfromtheorphanage
AT rogersmatthewe thestateoftheartofodorantreceptordeorphanizationareportfromtheorphanage
AT peterlinzita stateoftheartofodorantreceptordeorphanizationareportfromtheorphanage
AT firesteinstuart stateoftheartofodorantreceptordeorphanizationareportfromtheorphanage
AT rogersmatthewe stateoftheartofodorantreceptordeorphanizationareportfromtheorphanage