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Frequency of alleles and haplotypes of the human leukocyte antigen system in Bauru São Paulo, Brazil

BACKGROUND: HLA allele identification is used in bone marrow transplant programs as HLA compatibility between the donor and recipient may prevent graft rejection. OBJECTIVE: This study aimed to estimate the frequency of alleles and haplotypes of the HLA system in the region of Bauru and compare thes...

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Autores principales: Salvadori, Luana de Cassia, Santana, Fabiana Covolo de Souza, Marcos, Elaine Valim Camarinha
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Sociedade Brasileira de Hematologia e Hemoterapia 2014
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4005508/
https://www.ncbi.nlm.nih.gov/pubmed/24790535
http://dx.doi.org/10.5581/1516-8484.20140026
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author Salvadori, Luana de Cassia
Santana, Fabiana Covolo de Souza
Marcos, Elaine Valim Camarinha
author_facet Salvadori, Luana de Cassia
Santana, Fabiana Covolo de Souza
Marcos, Elaine Valim Camarinha
author_sort Salvadori, Luana de Cassia
collection PubMed
description BACKGROUND: HLA allele identification is used in bone marrow transplant programs as HLA compatibility between the donor and recipient may prevent graft rejection. OBJECTIVE: This study aimed to estimate the frequency of alleles and haplotypes of the HLA system in the region of Bauru and compare these with the frequencies found in other regions of the country. METHODS: HLA-A*, HLA-B*, and HLA-DRB1* allele frequencies and haplotypes were analyzed in a sample of 3542 volunteer donors at the National Registry of Voluntary Bone Marrow Donors (REDOME) in Bauru. HLA low resolution typing was performed using reverse line blot with the Dynal Reli™ SSO-HLA Typing Kit and automated Dynal AutoReli™48 device (Invitrogen, USA). RESULTS: Twenty, 36, and 13 HLA-A*, HLA-B*, and HLA-DRB1* allele groups, respectively, were identified. The most common alleles for each locus were HLA-A*02, HLA-B*35, and HLA-DRB1*07. The most frequent haplotype was A*01-B*08-DRB1*03. Allele and haplotype frequencies were compared to other regions in Brazil and the similarities and differences among populations are shown. CONCLUSION: The knowledge of the immunogenic profile of a population contributes to the comprehension of the historical and anthropological aspects of different regions. Moreover, this helps to find suitable donors quickly, thereby shortening waiting lists for transplants and thus increasing survival rates among recipients.
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spelling pubmed-40055082014-04-30 Frequency of alleles and haplotypes of the human leukocyte antigen system in Bauru São Paulo, Brazil Salvadori, Luana de Cassia Santana, Fabiana Covolo de Souza Marcos, Elaine Valim Camarinha Rev Bras Hematol Hemoter Original article BACKGROUND: HLA allele identification is used in bone marrow transplant programs as HLA compatibility between the donor and recipient may prevent graft rejection. OBJECTIVE: This study aimed to estimate the frequency of alleles and haplotypes of the HLA system in the region of Bauru and compare these with the frequencies found in other regions of the country. METHODS: HLA-A*, HLA-B*, and HLA-DRB1* allele frequencies and haplotypes were analyzed in a sample of 3542 volunteer donors at the National Registry of Voluntary Bone Marrow Donors (REDOME) in Bauru. HLA low resolution typing was performed using reverse line blot with the Dynal Reli™ SSO-HLA Typing Kit and automated Dynal AutoReli™48 device (Invitrogen, USA). RESULTS: Twenty, 36, and 13 HLA-A*, HLA-B*, and HLA-DRB1* allele groups, respectively, were identified. The most common alleles for each locus were HLA-A*02, HLA-B*35, and HLA-DRB1*07. The most frequent haplotype was A*01-B*08-DRB1*03. Allele and haplotype frequencies were compared to other regions in Brazil and the similarities and differences among populations are shown. CONCLUSION: The knowledge of the immunogenic profile of a population contributes to the comprehension of the historical and anthropological aspects of different regions. Moreover, this helps to find suitable donors quickly, thereby shortening waiting lists for transplants and thus increasing survival rates among recipients. Sociedade Brasileira de Hematologia e Hemoterapia 2014 2014-07-08 /pmc/articles/PMC4005508/ /pubmed/24790535 http://dx.doi.org/10.5581/1516-8484.20140026 Text en © 2014 Associação Brasileira de Hematologia, Hemoterapia e Terapia Celular. Published by Elsevier Editora Ltda. All rights reserved. http://creativecommons.org/licenses/by-nc-nd/3.0/ This is an open access article under the CC BY-NC-ND license (http://creativecommons.org/licenses/by-nc-nd/3.0/).
spellingShingle Original article
Salvadori, Luana de Cassia
Santana, Fabiana Covolo de Souza
Marcos, Elaine Valim Camarinha
Frequency of alleles and haplotypes of the human leukocyte antigen system in Bauru São Paulo, Brazil
title Frequency of alleles and haplotypes of the human leukocyte antigen system in Bauru São Paulo, Brazil
title_full Frequency of alleles and haplotypes of the human leukocyte antigen system in Bauru São Paulo, Brazil
title_fullStr Frequency of alleles and haplotypes of the human leukocyte antigen system in Bauru São Paulo, Brazil
title_full_unstemmed Frequency of alleles and haplotypes of the human leukocyte antigen system in Bauru São Paulo, Brazil
title_short Frequency of alleles and haplotypes of the human leukocyte antigen system in Bauru São Paulo, Brazil
title_sort frequency of alleles and haplotypes of the human leukocyte antigen system in bauru são paulo, brazil
topic Original article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4005508/
https://www.ncbi.nlm.nih.gov/pubmed/24790535
http://dx.doi.org/10.5581/1516-8484.20140026
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