Cargando…
Strain/species identification in metagenomes using genome-specific markers
Shotgun metagenome sequencing has become a fast, cheap and high-throughput technology for characterizing microbial communities in complex environments and human body sites. However, accurate identification of microorganisms at the strain/species level remains extremely challenging. We present a nove...
Autores principales: | Tu, Qichao, He, Zhili, Zhou, Jizhong |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Oxford University Press
2014
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4005670/ https://www.ncbi.nlm.nih.gov/pubmed/24523352 http://dx.doi.org/10.1093/nar/gku138 |
Ejemplares similares
-
VB(12)Path for Accurate Metagenomic Profiling of Microbially Driven Cobalamin Synthesis Pathways
por: Zhou, Jiayin, et al.
Publicado: (2021) -
Identification and classification of reverse transcriptases in bacterial genomes and metagenomes
por: Sharifi, Fatemeh, et al.
Publicado: (2021) -
StrainXpress: strain aware metagenome assembly from short reads
por: Kang, Xiongbin, et al.
Publicado: (2022) -
Amino acid based de Bruijn graph algorithm for identifying complete coding genes from metagenomic and metatranscriptomic short reads
por: Liu, Jiemeng, et al.
Publicado: (2019) -
MetaPlatanus: a metagenome assembler that combines long-range sequence links and species-specific features
por: Kajitani, Rei, et al.
Publicado: (2021)