Cargando…
FineSplice, enhanced splice junction detection and quantification: a novel pipeline based on the assessment of diverse RNA-Seq alignment solutions
Alternative splicing is the main mechanism governing protein diversity. The recent developments in RNA-Seq technology have enabled the study of the global impact and regulation of this biological process. However, the lack of standardized protocols constitutes a major bottleneck in the analysis of a...
Autores principales: | Gatto, Alberto, Torroja-Fungairiño, Carlos, Mazzarotto, Francesco, Cook, Stuart A., Barton, Paul J. R., Sánchez-Cabo, Fátima, Lara-Pezzi, Enrique |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Oxford University Press
2014
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4005686/ https://www.ncbi.nlm.nih.gov/pubmed/24574529 http://dx.doi.org/10.1093/nar/gku166 |
Ejemplares similares
-
MapSplice: Accurate mapping of RNA-seq reads for splice junction discovery
por: Wang, Kai, et al.
Publicado: (2010) -
Detection and visualization of differential splicing in RNA-Seq data with JunctionSeq
por: Hartley, Stephen W., et al.
Publicado: (2016) -
Splice-Break: exploiting an RNA-seq splice junction algorithm to discover mitochondrial DNA deletion breakpoints and analyses of psychiatric disorders
por: Hjelm, Brooke E, et al.
Publicado: (2019) -
TrueSight: a new algorithm for splice junction detection using RNA-seq
por: Li, Yang, et al.
Publicado: (2013) -
The exon quantification pipeline (EQP): a comprehensive approach to the quantification of gene, exon and junction expression from RNA-seq data
por: Schuierer, Sven, et al.
Publicado: (2016)