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Origin Detection During Food-borne Disease Outbreaks - A Case Study of the 2011 EHEC/HUS Outbreak in Germany
The key challenge during food-borne disease outbreaks, e.g. the 2011 EHEC/HUS outbreak in Germany, is the design of efficient mitigation strategies based on a timely identification of the outbreak's spatial origin. Standard public health procedures typically use case-control studies and tracing...
Autores principales: | , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Public Library of Science
2014
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4011494/ https://www.ncbi.nlm.nih.gov/pubmed/24818065 http://dx.doi.org/10.1371/currents.outbreaks.f3fdeb08c5b9de7c09ed9cbcef5f01f2 |
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author | Manitz, Juliane Kneib, Thomas Schlather, Martin Helbing, Dirk Brockmann, Dirk |
author_facet | Manitz, Juliane Kneib, Thomas Schlather, Martin Helbing, Dirk Brockmann, Dirk |
author_sort | Manitz, Juliane |
collection | PubMed |
description | The key challenge during food-borne disease outbreaks, e.g. the 2011 EHEC/HUS outbreak in Germany, is the design of efficient mitigation strategies based on a timely identification of the outbreak's spatial origin. Standard public health procedures typically use case-control studies and tracings along food shipping chains. These methods are time-consuming and suffer from biased data collected slowly in patient interviews. Here we apply a recently developed, network-theoretical method to identify the spatial origin of food-borne disease outbreaks. Thereby, the network captures the transportation routes of contaminated foods. The technique only requires spatial information on case reports regularly collected by public health institutions and a model for the underlying food distribution network. The approach is based on the idea of replacing the conventional geographic distance with an effective distance that is derived from the topological structure of the underlying food distribution network. We show that this approach can efficiently identify most probable epicenters of food-borne disease outbreaks. We assess and discuss the method in the context of the 2011 EHEC epidemic. Based on plausible assumptions on the structure of the national food distribution network, the approach can correctly localize the origin of the 2011 German EHEC/HUS outbreak. |
format | Online Article Text |
id | pubmed-4011494 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2014 |
publisher | Public Library of Science |
record_format | MEDLINE/PubMed |
spelling | pubmed-40114942014-05-08 Origin Detection During Food-borne Disease Outbreaks - A Case Study of the 2011 EHEC/HUS Outbreak in Germany Manitz, Juliane Kneib, Thomas Schlather, Martin Helbing, Dirk Brockmann, Dirk PLoS Curr Research The key challenge during food-borne disease outbreaks, e.g. the 2011 EHEC/HUS outbreak in Germany, is the design of efficient mitigation strategies based on a timely identification of the outbreak's spatial origin. Standard public health procedures typically use case-control studies and tracings along food shipping chains. These methods are time-consuming and suffer from biased data collected slowly in patient interviews. Here we apply a recently developed, network-theoretical method to identify the spatial origin of food-borne disease outbreaks. Thereby, the network captures the transportation routes of contaminated foods. The technique only requires spatial information on case reports regularly collected by public health institutions and a model for the underlying food distribution network. The approach is based on the idea of replacing the conventional geographic distance with an effective distance that is derived from the topological structure of the underlying food distribution network. We show that this approach can efficiently identify most probable epicenters of food-borne disease outbreaks. We assess and discuss the method in the context of the 2011 EHEC epidemic. Based on plausible assumptions on the structure of the national food distribution network, the approach can correctly localize the origin of the 2011 German EHEC/HUS outbreak. Public Library of Science 2014-04-01 /pmc/articles/PMC4011494/ /pubmed/24818065 http://dx.doi.org/10.1371/currents.outbreaks.f3fdeb08c5b9de7c09ed9cbcef5f01f2 Text en http://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are properly credited. |
spellingShingle | Research Manitz, Juliane Kneib, Thomas Schlather, Martin Helbing, Dirk Brockmann, Dirk Origin Detection During Food-borne Disease Outbreaks - A Case Study of the 2011 EHEC/HUS Outbreak in Germany |
title | Origin Detection During Food-borne Disease Outbreaks - A Case Study
of the 2011 EHEC/HUS Outbreak in Germany |
title_full | Origin Detection During Food-borne Disease Outbreaks - A Case Study
of the 2011 EHEC/HUS Outbreak in Germany |
title_fullStr | Origin Detection During Food-borne Disease Outbreaks - A Case Study
of the 2011 EHEC/HUS Outbreak in Germany |
title_full_unstemmed | Origin Detection During Food-borne Disease Outbreaks - A Case Study
of the 2011 EHEC/HUS Outbreak in Germany |
title_short | Origin Detection During Food-borne Disease Outbreaks - A Case Study
of the 2011 EHEC/HUS Outbreak in Germany |
title_sort | origin detection during food-borne disease outbreaks - a case study
of the 2011 ehec/hus outbreak in germany |
topic | Research |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4011494/ https://www.ncbi.nlm.nih.gov/pubmed/24818065 http://dx.doi.org/10.1371/currents.outbreaks.f3fdeb08c5b9de7c09ed9cbcef5f01f2 |
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