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A loop-mediated isothermal amplification assay for the visual detection of duck circovirus
BACKGROUND: Duck circovirus (DuCV) infection in farmed ducks is associated with growth problems or retardation syndromes. Rapid identification of DuCV infected ducks is essential to control DuCV effectively. Therefore(,) this study aims to develop of an assay for DuCV to be highly specific, sensitiv...
Autores principales: | , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
BioMed Central
2014
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4013541/ https://www.ncbi.nlm.nih.gov/pubmed/24775810 http://dx.doi.org/10.1186/1743-422X-11-76 |
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author | Xie, Liji Xie, Zhixun Zhao, Guangyuan Liu, Jiabo Pang, Yaoshan Deng, Xianwen Xie, Zhiqin Fan, Qing Luo, Sisi |
author_facet | Xie, Liji Xie, Zhixun Zhao, Guangyuan Liu, Jiabo Pang, Yaoshan Deng, Xianwen Xie, Zhiqin Fan, Qing Luo, Sisi |
author_sort | Xie, Liji |
collection | PubMed |
description | BACKGROUND: Duck circovirus (DuCV) infection in farmed ducks is associated with growth problems or retardation syndromes. Rapid identification of DuCV infected ducks is essential to control DuCV effectively. Therefore(,) this study aims to develop of an assay for DuCV to be highly specific, sensitive, and simple without any specialized equipment. METHODS: A set of six specific primers was designed to target the sequences of the Rep gene of DuCV, and A loop-mediated isothermal amplification (LAMP) assay were developed and the reaction conditions were optimized for rapid detection of DuCV. RESULTS: The LAMP assay reaction was conducted in a 62°C water bath condition for 50 min. Then the amplification products were visualized directly for color changes. This LAMP assay is highly sensitive and able to detect twenty copies of DuCV DNA. The specificity of this LAMP assay was supported by no cross-reaction with other duck pathogens. CONCLUSION: This LAMP method for DuCV is highly specific and sensitive and can be used as a rapid and direct diagnostic assay for testing clinical samples. |
format | Online Article Text |
id | pubmed-4013541 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2014 |
publisher | BioMed Central |
record_format | MEDLINE/PubMed |
spelling | pubmed-40135412014-05-09 A loop-mediated isothermal amplification assay for the visual detection of duck circovirus Xie, Liji Xie, Zhixun Zhao, Guangyuan Liu, Jiabo Pang, Yaoshan Deng, Xianwen Xie, Zhiqin Fan, Qing Luo, Sisi Virol J Methodology BACKGROUND: Duck circovirus (DuCV) infection in farmed ducks is associated with growth problems or retardation syndromes. Rapid identification of DuCV infected ducks is essential to control DuCV effectively. Therefore(,) this study aims to develop of an assay for DuCV to be highly specific, sensitive, and simple without any specialized equipment. METHODS: A set of six specific primers was designed to target the sequences of the Rep gene of DuCV, and A loop-mediated isothermal amplification (LAMP) assay were developed and the reaction conditions were optimized for rapid detection of DuCV. RESULTS: The LAMP assay reaction was conducted in a 62°C water bath condition for 50 min. Then the amplification products were visualized directly for color changes. This LAMP assay is highly sensitive and able to detect twenty copies of DuCV DNA. The specificity of this LAMP assay was supported by no cross-reaction with other duck pathogens. CONCLUSION: This LAMP method for DuCV is highly specific and sensitive and can be used as a rapid and direct diagnostic assay for testing clinical samples. BioMed Central 2014-04-29 /pmc/articles/PMC4013541/ /pubmed/24775810 http://dx.doi.org/10.1186/1743-422X-11-76 Text en Copyright © 2014 Xie et al.; licensee BioMed Central Ltd. http://creativecommons.org/licenses/by/2.0 This is an Open Access article distributed under the terms of the Creative Commons Attribution License ( http://creativecommons.org/licenses/by/2.0), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly credited. The Creative Commons Public Domain Dedication waiver ( http://creativecommons.org/publicdomain/zero/1.0/) applies to the data made available in this article, unless otherwise stated. |
spellingShingle | Methodology Xie, Liji Xie, Zhixun Zhao, Guangyuan Liu, Jiabo Pang, Yaoshan Deng, Xianwen Xie, Zhiqin Fan, Qing Luo, Sisi A loop-mediated isothermal amplification assay for the visual detection of duck circovirus |
title | A loop-mediated isothermal amplification assay for the visual detection of duck circovirus |
title_full | A loop-mediated isothermal amplification assay for the visual detection of duck circovirus |
title_fullStr | A loop-mediated isothermal amplification assay for the visual detection of duck circovirus |
title_full_unstemmed | A loop-mediated isothermal amplification assay for the visual detection of duck circovirus |
title_short | A loop-mediated isothermal amplification assay for the visual detection of duck circovirus |
title_sort | loop-mediated isothermal amplification assay for the visual detection of duck circovirus |
topic | Methodology |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4013541/ https://www.ncbi.nlm.nih.gov/pubmed/24775810 http://dx.doi.org/10.1186/1743-422X-11-76 |
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