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A loop-mediated isothermal amplification assay for the visual detection of duck circovirus

BACKGROUND: Duck circovirus (DuCV) infection in farmed ducks is associated with growth problems or retardation syndromes. Rapid identification of DuCV infected ducks is essential to control DuCV effectively. Therefore(,) this study aims to develop of an assay for DuCV to be highly specific, sensitiv...

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Autores principales: Xie, Liji, Xie, Zhixun, Zhao, Guangyuan, Liu, Jiabo, Pang, Yaoshan, Deng, Xianwen, Xie, Zhiqin, Fan, Qing, Luo, Sisi
Formato: Online Artículo Texto
Lenguaje:English
Publicado: BioMed Central 2014
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4013541/
https://www.ncbi.nlm.nih.gov/pubmed/24775810
http://dx.doi.org/10.1186/1743-422X-11-76
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author Xie, Liji
Xie, Zhixun
Zhao, Guangyuan
Liu, Jiabo
Pang, Yaoshan
Deng, Xianwen
Xie, Zhiqin
Fan, Qing
Luo, Sisi
author_facet Xie, Liji
Xie, Zhixun
Zhao, Guangyuan
Liu, Jiabo
Pang, Yaoshan
Deng, Xianwen
Xie, Zhiqin
Fan, Qing
Luo, Sisi
author_sort Xie, Liji
collection PubMed
description BACKGROUND: Duck circovirus (DuCV) infection in farmed ducks is associated with growth problems or retardation syndromes. Rapid identification of DuCV infected ducks is essential to control DuCV effectively. Therefore(,) this study aims to develop of an assay for DuCV to be highly specific, sensitive, and simple without any specialized equipment. METHODS: A set of six specific primers was designed to target the sequences of the Rep gene of DuCV, and A loop-mediated isothermal amplification (LAMP) assay were developed and the reaction conditions were optimized for rapid detection of DuCV. RESULTS: The LAMP assay reaction was conducted in a 62°C water bath condition for 50 min. Then the amplification products were visualized directly for color changes. This LAMP assay is highly sensitive and able to detect twenty copies of DuCV DNA. The specificity of this LAMP assay was supported by no cross-reaction with other duck pathogens. CONCLUSION: This LAMP method for DuCV is highly specific and sensitive and can be used as a rapid and direct diagnostic assay for testing clinical samples.
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spelling pubmed-40135412014-05-09 A loop-mediated isothermal amplification assay for the visual detection of duck circovirus Xie, Liji Xie, Zhixun Zhao, Guangyuan Liu, Jiabo Pang, Yaoshan Deng, Xianwen Xie, Zhiqin Fan, Qing Luo, Sisi Virol J Methodology BACKGROUND: Duck circovirus (DuCV) infection in farmed ducks is associated with growth problems or retardation syndromes. Rapid identification of DuCV infected ducks is essential to control DuCV effectively. Therefore(,) this study aims to develop of an assay for DuCV to be highly specific, sensitive, and simple without any specialized equipment. METHODS: A set of six specific primers was designed to target the sequences of the Rep gene of DuCV, and A loop-mediated isothermal amplification (LAMP) assay were developed and the reaction conditions were optimized for rapid detection of DuCV. RESULTS: The LAMP assay reaction was conducted in a 62°C water bath condition for 50 min. Then the amplification products were visualized directly for color changes. This LAMP assay is highly sensitive and able to detect twenty copies of DuCV DNA. The specificity of this LAMP assay was supported by no cross-reaction with other duck pathogens. CONCLUSION: This LAMP method for DuCV is highly specific and sensitive and can be used as a rapid and direct diagnostic assay for testing clinical samples. BioMed Central 2014-04-29 /pmc/articles/PMC4013541/ /pubmed/24775810 http://dx.doi.org/10.1186/1743-422X-11-76 Text en Copyright © 2014 Xie et al.; licensee BioMed Central Ltd. http://creativecommons.org/licenses/by/2.0 This is an Open Access article distributed under the terms of the Creative Commons Attribution License ( http://creativecommons.org/licenses/by/2.0), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly credited. The Creative Commons Public Domain Dedication waiver ( http://creativecommons.org/publicdomain/zero/1.0/) applies to the data made available in this article, unless otherwise stated.
spellingShingle Methodology
Xie, Liji
Xie, Zhixun
Zhao, Guangyuan
Liu, Jiabo
Pang, Yaoshan
Deng, Xianwen
Xie, Zhiqin
Fan, Qing
Luo, Sisi
A loop-mediated isothermal amplification assay for the visual detection of duck circovirus
title A loop-mediated isothermal amplification assay for the visual detection of duck circovirus
title_full A loop-mediated isothermal amplification assay for the visual detection of duck circovirus
title_fullStr A loop-mediated isothermal amplification assay for the visual detection of duck circovirus
title_full_unstemmed A loop-mediated isothermal amplification assay for the visual detection of duck circovirus
title_short A loop-mediated isothermal amplification assay for the visual detection of duck circovirus
title_sort loop-mediated isothermal amplification assay for the visual detection of duck circovirus
topic Methodology
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4013541/
https://www.ncbi.nlm.nih.gov/pubmed/24775810
http://dx.doi.org/10.1186/1743-422X-11-76
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