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Genome-Wide Identification, Evolution and Expression Analysis of the Grape (Vitis vinifera L.) Zinc Finger-Homeodomain Gene Family

Plant zinc finger-homeodomain (ZHD) genes encode a family of transcription factors that have been demonstrated to play an important role in the regulation of plant growth and development. In this study, we identified a total of 13 ZHD genes (VvZHD) in the grape genome that were further classified in...

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Autores principales: Wang, Hao, Yin, Xiangjing, Li, Xiaoqin, Wang, Li, Zheng, Yi, Xu, Xiaozhao, Zhang, Yucheng, Wang, Xiping
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Molecular Diversity Preservation International (MDPI) 2014
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4013592/
https://www.ncbi.nlm.nih.gov/pubmed/24705465
http://dx.doi.org/10.3390/ijms15045730
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author Wang, Hao
Yin, Xiangjing
Li, Xiaoqin
Wang, Li
Zheng, Yi
Xu, Xiaozhao
Zhang, Yucheng
Wang, Xiping
author_facet Wang, Hao
Yin, Xiangjing
Li, Xiaoqin
Wang, Li
Zheng, Yi
Xu, Xiaozhao
Zhang, Yucheng
Wang, Xiping
author_sort Wang, Hao
collection PubMed
description Plant zinc finger-homeodomain (ZHD) genes encode a family of transcription factors that have been demonstrated to play an important role in the regulation of plant growth and development. In this study, we identified a total of 13 ZHD genes (VvZHD) in the grape genome that were further classified into at least seven groups. Genome synteny analysis revealed that a number of VvZHD genes were present in the corresponding syntenic blocks of Arabidopsis, indicating that they arose before the divergence of these two species. Gene expression analysis showed that the identified VvZHD genes displayed distinct spatiotemporal expression patterns, and were differentially regulated under various stress conditions and hormone treatments, suggesting that the grape VvZHDs might be also involved in plant response to a variety of biotic and abiotic insults. Our work provides insightful information and knowledge about the ZHD genes in grape, which provides a framework for further characterization of their roles in regulation of stress tolerance as well as other aspects of grape productivity.
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spelling pubmed-40135922014-05-08 Genome-Wide Identification, Evolution and Expression Analysis of the Grape (Vitis vinifera L.) Zinc Finger-Homeodomain Gene Family Wang, Hao Yin, Xiangjing Li, Xiaoqin Wang, Li Zheng, Yi Xu, Xiaozhao Zhang, Yucheng Wang, Xiping Int J Mol Sci Article Plant zinc finger-homeodomain (ZHD) genes encode a family of transcription factors that have been demonstrated to play an important role in the regulation of plant growth and development. In this study, we identified a total of 13 ZHD genes (VvZHD) in the grape genome that were further classified into at least seven groups. Genome synteny analysis revealed that a number of VvZHD genes were present in the corresponding syntenic blocks of Arabidopsis, indicating that they arose before the divergence of these two species. Gene expression analysis showed that the identified VvZHD genes displayed distinct spatiotemporal expression patterns, and were differentially regulated under various stress conditions and hormone treatments, suggesting that the grape VvZHDs might be also involved in plant response to a variety of biotic and abiotic insults. Our work provides insightful information and knowledge about the ZHD genes in grape, which provides a framework for further characterization of their roles in regulation of stress tolerance as well as other aspects of grape productivity. Molecular Diversity Preservation International (MDPI) 2014-04-03 /pmc/articles/PMC4013592/ /pubmed/24705465 http://dx.doi.org/10.3390/ijms15045730 Text en © 2014 by the authors; licensee MDPI, Basel, Switzerland http://creativecommons.org/licenses/by/3.0/ This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution license (http://creativecommons.org/licenses/by/3.0/).
spellingShingle Article
Wang, Hao
Yin, Xiangjing
Li, Xiaoqin
Wang, Li
Zheng, Yi
Xu, Xiaozhao
Zhang, Yucheng
Wang, Xiping
Genome-Wide Identification, Evolution and Expression Analysis of the Grape (Vitis vinifera L.) Zinc Finger-Homeodomain Gene Family
title Genome-Wide Identification, Evolution and Expression Analysis of the Grape (Vitis vinifera L.) Zinc Finger-Homeodomain Gene Family
title_full Genome-Wide Identification, Evolution and Expression Analysis of the Grape (Vitis vinifera L.) Zinc Finger-Homeodomain Gene Family
title_fullStr Genome-Wide Identification, Evolution and Expression Analysis of the Grape (Vitis vinifera L.) Zinc Finger-Homeodomain Gene Family
title_full_unstemmed Genome-Wide Identification, Evolution and Expression Analysis of the Grape (Vitis vinifera L.) Zinc Finger-Homeodomain Gene Family
title_short Genome-Wide Identification, Evolution and Expression Analysis of the Grape (Vitis vinifera L.) Zinc Finger-Homeodomain Gene Family
title_sort genome-wide identification, evolution and expression analysis of the grape (vitis vinifera l.) zinc finger-homeodomain gene family
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4013592/
https://www.ncbi.nlm.nih.gov/pubmed/24705465
http://dx.doi.org/10.3390/ijms15045730
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