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A branching process model for the analysis of abortive colony size distributions in carbon ion-irradiated normal human fibroblasts
A single cell can form a colony, and ionizing irradiation has long been known to reduce such a cellular clonogenic potential. Analysis of abortive colonies unable to continue to grow should provide important information on the reproductive cell death (RCD) following irradiation. Our previous analysi...
Autores principales: | , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Oxford University Press
2014
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4014152/ https://www.ncbi.nlm.nih.gov/pubmed/24501383 http://dx.doi.org/10.1093/jrr/rrt129 |
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author | Sakashita, Tetsuya Hamada, Nobuyuki Kawaguchi, Isao Hara, Takamitsu Kobayashi, Yasuhiko Saito, Kimiaki |
author_facet | Sakashita, Tetsuya Hamada, Nobuyuki Kawaguchi, Isao Hara, Takamitsu Kobayashi, Yasuhiko Saito, Kimiaki |
author_sort | Sakashita, Tetsuya |
collection | PubMed |
description | A single cell can form a colony, and ionizing irradiation has long been known to reduce such a cellular clonogenic potential. Analysis of abortive colonies unable to continue to grow should provide important information on the reproductive cell death (RCD) following irradiation. Our previous analysis with a branching process model showed that the RCD in normal human fibroblasts can persist over 16 generations following irradiation with low linear energy transfer (LET) γ-rays. Here we further set out to evaluate the RCD persistency in abortive colonies arising from normal human fibroblasts exposed to high-LET carbon ions (18.3 MeV/u, 108 keV/µm). We found that the abortive colony size distribution determined by biological experiments follows a linear relationship on the log–log plot, and that the Monte Carlo simulation using the RCD probability estimated from such a linear relationship well simulates the experimentally determined surviving fraction and the relative biological effectiveness (RBE). We identified the short-term phase and long-term phase for the persistent RCD following carbon-ion irradiation, which were similar to those previously identified following γ-irradiation. Taken together, our results suggest that subsequent secondary or tertiary colony formation would be invaluable for understanding the long-lasting RCD. All together, our framework for analysis with a branching process model and a colony formation assay is applicable to determination of cellular responses to low- and high-LET radiation, and suggests that the long-lasting RCD is a pivotal determinant of the surviving fraction and the RBE. |
format | Online Article Text |
id | pubmed-4014152 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2014 |
publisher | Oxford University Press |
record_format | MEDLINE/PubMed |
spelling | pubmed-40141522014-05-12 A branching process model for the analysis of abortive colony size distributions in carbon ion-irradiated normal human fibroblasts Sakashita, Tetsuya Hamada, Nobuyuki Kawaguchi, Isao Hara, Takamitsu Kobayashi, Yasuhiko Saito, Kimiaki J Radiat Res Biology A single cell can form a colony, and ionizing irradiation has long been known to reduce such a cellular clonogenic potential. Analysis of abortive colonies unable to continue to grow should provide important information on the reproductive cell death (RCD) following irradiation. Our previous analysis with a branching process model showed that the RCD in normal human fibroblasts can persist over 16 generations following irradiation with low linear energy transfer (LET) γ-rays. Here we further set out to evaluate the RCD persistency in abortive colonies arising from normal human fibroblasts exposed to high-LET carbon ions (18.3 MeV/u, 108 keV/µm). We found that the abortive colony size distribution determined by biological experiments follows a linear relationship on the log–log plot, and that the Monte Carlo simulation using the RCD probability estimated from such a linear relationship well simulates the experimentally determined surviving fraction and the relative biological effectiveness (RBE). We identified the short-term phase and long-term phase for the persistent RCD following carbon-ion irradiation, which were similar to those previously identified following γ-irradiation. Taken together, our results suggest that subsequent secondary or tertiary colony formation would be invaluable for understanding the long-lasting RCD. All together, our framework for analysis with a branching process model and a colony formation assay is applicable to determination of cellular responses to low- and high-LET radiation, and suggests that the long-lasting RCD is a pivotal determinant of the surviving fraction and the RBE. Oxford University Press 2014-05 2014-02-04 /pmc/articles/PMC4014152/ /pubmed/24501383 http://dx.doi.org/10.1093/jrr/rrt129 Text en © The Author 2014. Published by Oxford University Press on behalf of The Japan Radiation Research Society and Japanese Society for Radiation Oncology. http://creativecommons.org/licenses/by/3.0/ This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/3.0/), which permits unrestricted reuse, distribution, and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Biology Sakashita, Tetsuya Hamada, Nobuyuki Kawaguchi, Isao Hara, Takamitsu Kobayashi, Yasuhiko Saito, Kimiaki A branching process model for the analysis of abortive colony size distributions in carbon ion-irradiated normal human fibroblasts |
title | A branching process model for the analysis of abortive colony size distributions in carbon ion-irradiated normal human fibroblasts |
title_full | A branching process model for the analysis of abortive colony size distributions in carbon ion-irradiated normal human fibroblasts |
title_fullStr | A branching process model for the analysis of abortive colony size distributions in carbon ion-irradiated normal human fibroblasts |
title_full_unstemmed | A branching process model for the analysis of abortive colony size distributions in carbon ion-irradiated normal human fibroblasts |
title_short | A branching process model for the analysis of abortive colony size distributions in carbon ion-irradiated normal human fibroblasts |
title_sort | branching process model for the analysis of abortive colony size distributions in carbon ion-irradiated normal human fibroblasts |
topic | Biology |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4014152/ https://www.ncbi.nlm.nih.gov/pubmed/24501383 http://dx.doi.org/10.1093/jrr/rrt129 |
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