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A branching process model for the analysis of abortive colony size distributions in carbon ion-irradiated normal human fibroblasts

A single cell can form a colony, and ionizing irradiation has long been known to reduce such a cellular clonogenic potential. Analysis of abortive colonies unable to continue to grow should provide important information on the reproductive cell death (RCD) following irradiation. Our previous analysi...

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Autores principales: Sakashita, Tetsuya, Hamada, Nobuyuki, Kawaguchi, Isao, Hara, Takamitsu, Kobayashi, Yasuhiko, Saito, Kimiaki
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Oxford University Press 2014
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4014152/
https://www.ncbi.nlm.nih.gov/pubmed/24501383
http://dx.doi.org/10.1093/jrr/rrt129
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author Sakashita, Tetsuya
Hamada, Nobuyuki
Kawaguchi, Isao
Hara, Takamitsu
Kobayashi, Yasuhiko
Saito, Kimiaki
author_facet Sakashita, Tetsuya
Hamada, Nobuyuki
Kawaguchi, Isao
Hara, Takamitsu
Kobayashi, Yasuhiko
Saito, Kimiaki
author_sort Sakashita, Tetsuya
collection PubMed
description A single cell can form a colony, and ionizing irradiation has long been known to reduce such a cellular clonogenic potential. Analysis of abortive colonies unable to continue to grow should provide important information on the reproductive cell death (RCD) following irradiation. Our previous analysis with a branching process model showed that the RCD in normal human fibroblasts can persist over 16 generations following irradiation with low linear energy transfer (LET) γ-rays. Here we further set out to evaluate the RCD persistency in abortive colonies arising from normal human fibroblasts exposed to high-LET carbon ions (18.3 MeV/u, 108 keV/µm). We found that the abortive colony size distribution determined by biological experiments follows a linear relationship on the log–log plot, and that the Monte Carlo simulation using the RCD probability estimated from such a linear relationship well simulates the experimentally determined surviving fraction and the relative biological effectiveness (RBE). We identified the short-term phase and long-term phase for the persistent RCD following carbon-ion irradiation, which were similar to those previously identified following γ-irradiation. Taken together, our results suggest that subsequent secondary or tertiary colony formation would be invaluable for understanding the long-lasting RCD. All together, our framework for analysis with a branching process model and a colony formation assay is applicable to determination of cellular responses to low- and high-LET radiation, and suggests that the long-lasting RCD is a pivotal determinant of the surviving fraction and the RBE.
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spelling pubmed-40141522014-05-12 A branching process model for the analysis of abortive colony size distributions in carbon ion-irradiated normal human fibroblasts Sakashita, Tetsuya Hamada, Nobuyuki Kawaguchi, Isao Hara, Takamitsu Kobayashi, Yasuhiko Saito, Kimiaki J Radiat Res Biology A single cell can form a colony, and ionizing irradiation has long been known to reduce such a cellular clonogenic potential. Analysis of abortive colonies unable to continue to grow should provide important information on the reproductive cell death (RCD) following irradiation. Our previous analysis with a branching process model showed that the RCD in normal human fibroblasts can persist over 16 generations following irradiation with low linear energy transfer (LET) γ-rays. Here we further set out to evaluate the RCD persistency in abortive colonies arising from normal human fibroblasts exposed to high-LET carbon ions (18.3 MeV/u, 108 keV/µm). We found that the abortive colony size distribution determined by biological experiments follows a linear relationship on the log–log plot, and that the Monte Carlo simulation using the RCD probability estimated from such a linear relationship well simulates the experimentally determined surviving fraction and the relative biological effectiveness (RBE). We identified the short-term phase and long-term phase for the persistent RCD following carbon-ion irradiation, which were similar to those previously identified following γ-irradiation. Taken together, our results suggest that subsequent secondary or tertiary colony formation would be invaluable for understanding the long-lasting RCD. All together, our framework for analysis with a branching process model and a colony formation assay is applicable to determination of cellular responses to low- and high-LET radiation, and suggests that the long-lasting RCD is a pivotal determinant of the surviving fraction and the RBE. Oxford University Press 2014-05 2014-02-04 /pmc/articles/PMC4014152/ /pubmed/24501383 http://dx.doi.org/10.1093/jrr/rrt129 Text en © The Author 2014. Published by Oxford University Press on behalf of The Japan Radiation Research Society and Japanese Society for Radiation Oncology. http://creativecommons.org/licenses/by/3.0/ This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/3.0/), which permits unrestricted reuse, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Biology
Sakashita, Tetsuya
Hamada, Nobuyuki
Kawaguchi, Isao
Hara, Takamitsu
Kobayashi, Yasuhiko
Saito, Kimiaki
A branching process model for the analysis of abortive colony size distributions in carbon ion-irradiated normal human fibroblasts
title A branching process model for the analysis of abortive colony size distributions in carbon ion-irradiated normal human fibroblasts
title_full A branching process model for the analysis of abortive colony size distributions in carbon ion-irradiated normal human fibroblasts
title_fullStr A branching process model for the analysis of abortive colony size distributions in carbon ion-irradiated normal human fibroblasts
title_full_unstemmed A branching process model for the analysis of abortive colony size distributions in carbon ion-irradiated normal human fibroblasts
title_short A branching process model for the analysis of abortive colony size distributions in carbon ion-irradiated normal human fibroblasts
title_sort branching process model for the analysis of abortive colony size distributions in carbon ion-irradiated normal human fibroblasts
topic Biology
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4014152/
https://www.ncbi.nlm.nih.gov/pubmed/24501383
http://dx.doi.org/10.1093/jrr/rrt129
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