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The effect of 5′untranslated region polymorphism in EGF gene, rs4444903, on colorectal cancer
AIM: The purpose of this study was to determine the relationship of rs4444903 (EGF+61A/G) SNP genotype with colorectal cancer and tumor stage in an Iranian population. BACKGROUND: Epidermal growth factor (EGF) is one of the important proteins that determine survival of cells. EGF binds to its recept...
Autores principales: | , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Research Institute for Gastroenterology and Liver Diseases
2013
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4017510/ https://www.ncbi.nlm.nih.gov/pubmed/24834259 |
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author | Chaleshi, Vahid Haghighi, Mahdi Montazer Javadi, Gholam Reza Fatemi, Seyed Reza Vahedi, Mohsen Zali, Mohammad Reza |
author_facet | Chaleshi, Vahid Haghighi, Mahdi Montazer Javadi, Gholam Reza Fatemi, Seyed Reza Vahedi, Mohsen Zali, Mohammad Reza |
author_sort | Chaleshi, Vahid |
collection | PubMed |
description | AIM: The purpose of this study was to determine the relationship of rs4444903 (EGF+61A/G) SNP genotype with colorectal cancer and tumor stage in an Iranian population. BACKGROUND: Epidermal growth factor (EGF) is one of the important proteins that determine survival of cells. EGF binds to its receptor on the cell surface and then activates some of the cell signaling pathway networks within cells that lead to activation or deactivation of factors which are responsible for growth and apoptosis of cells. In this study we assessed the association in EGF polymorphism rs4444903 with colorectal cancer (CRC) in Iranian population. PATIENTS AND METHODS: We conducted case-control study to investigate the association of polymorphism rs4444903 in EGF, with colorectal cancer risk in Iranian population. Analyzed Polymorphism of EGF rs4444903 with restriction fragment length polymorphisms (RFLP) among two groups of subjects consisting of including 220 cases with colorectal cancer and 220 healthy individuals as controls. Mutations were confirmed in 10% of the samples by direct sequencing. RESULTS: The frequencies of AA, AG and GG genotypes among cases with colorectal cancer were 28.2, 46.8, and 25.0 % respectively and in controls genotype frequencies were 23.2, 56.4, and 20.5 %, respectively. Frequency of A allele among case group was 51.6% and for control group was 51.4%. The frequency of G allele in case and control was, respectively 48.4% and 48.6% (OR= 1.009, 95% CI= 0.775-1.315; P= 0.946). The percentage of Stage 0, I, II, III, IV were 5%, 9.35%, 38.84%, 30.21% and 16.54%, respectively, among the cases. However, no significant association between this polymorphism and CRC stage was observed (p=0.626). CONCLUSION: Our data suggest a SNP rs4444903 may not represent a risk factor in the development and progression of CRC among Iranian population. |
format | Online Article Text |
id | pubmed-4017510 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2013 |
publisher | Research Institute for Gastroenterology and Liver Diseases |
record_format | MEDLINE/PubMed |
spelling | pubmed-40175102014-05-15 The effect of 5′untranslated region polymorphism in EGF gene, rs4444903, on colorectal cancer Chaleshi, Vahid Haghighi, Mahdi Montazer Javadi, Gholam Reza Fatemi, Seyed Reza Vahedi, Mohsen Zali, Mohammad Reza Gastroenterol Hepatol Bed Bench Original Article AIM: The purpose of this study was to determine the relationship of rs4444903 (EGF+61A/G) SNP genotype with colorectal cancer and tumor stage in an Iranian population. BACKGROUND: Epidermal growth factor (EGF) is one of the important proteins that determine survival of cells. EGF binds to its receptor on the cell surface and then activates some of the cell signaling pathway networks within cells that lead to activation or deactivation of factors which are responsible for growth and apoptosis of cells. In this study we assessed the association in EGF polymorphism rs4444903 with colorectal cancer (CRC) in Iranian population. PATIENTS AND METHODS: We conducted case-control study to investigate the association of polymorphism rs4444903 in EGF, with colorectal cancer risk in Iranian population. Analyzed Polymorphism of EGF rs4444903 with restriction fragment length polymorphisms (RFLP) among two groups of subjects consisting of including 220 cases with colorectal cancer and 220 healthy individuals as controls. Mutations were confirmed in 10% of the samples by direct sequencing. RESULTS: The frequencies of AA, AG and GG genotypes among cases with colorectal cancer were 28.2, 46.8, and 25.0 % respectively and in controls genotype frequencies were 23.2, 56.4, and 20.5 %, respectively. Frequency of A allele among case group was 51.6% and for control group was 51.4%. The frequency of G allele in case and control was, respectively 48.4% and 48.6% (OR= 1.009, 95% CI= 0.775-1.315; P= 0.946). The percentage of Stage 0, I, II, III, IV were 5%, 9.35%, 38.84%, 30.21% and 16.54%, respectively, among the cases. However, no significant association between this polymorphism and CRC stage was observed (p=0.626). CONCLUSION: Our data suggest a SNP rs4444903 may not represent a risk factor in the development and progression of CRC among Iranian population. Research Institute for Gastroenterology and Liver Diseases 2013 /pmc/articles/PMC4017510/ /pubmed/24834259 Text en Copyright © 2013 Research Institute for Gastroenterology and Liver Diseases http://creativecommons.org/licenses/by-nc/3.0/ This work is licensed under a Creative Commons Attribution-NonCommercial 3.0 Unported License which allows users to read, copy, distribute and make derivative works for non-commercial purposes from the material, as long as the author of the original work is cited properly. |
spellingShingle | Original Article Chaleshi, Vahid Haghighi, Mahdi Montazer Javadi, Gholam Reza Fatemi, Seyed Reza Vahedi, Mohsen Zali, Mohammad Reza The effect of 5′untranslated region polymorphism in EGF gene, rs4444903, on colorectal cancer |
title | The effect of 5′untranslated region polymorphism in EGF gene, rs4444903, on colorectal cancer |
title_full | The effect of 5′untranslated region polymorphism in EGF gene, rs4444903, on colorectal cancer |
title_fullStr | The effect of 5′untranslated region polymorphism in EGF gene, rs4444903, on colorectal cancer |
title_full_unstemmed | The effect of 5′untranslated region polymorphism in EGF gene, rs4444903, on colorectal cancer |
title_short | The effect of 5′untranslated region polymorphism in EGF gene, rs4444903, on colorectal cancer |
title_sort | effect of 5′untranslated region polymorphism in egf gene, rs4444903, on colorectal cancer |
topic | Original Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4017510/ https://www.ncbi.nlm.nih.gov/pubmed/24834259 |
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