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NMR based metabonomics study on celiac disease in the blood serum
AIM: The aim of this study is to look for the proper methods that would be a major step towards untreated CD diagnosis and seek the metabolic biomarkers causes of CD and compare them to control group. BACKGROUND: Celiac disease (CD) is a common autoimmune disorder that is not easily diagnosed using...
Autores principales: | , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Research Institute for Gastroenterology and Liver Diseases
2013
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4017521/ https://www.ncbi.nlm.nih.gov/pubmed/24834271 |
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author | Fathi, Fariba Ektefa, Fatemeh Arefi Oskouie, Afsaneh Rostami, Kamran Rezaei-Tavirani, Mostafa Houshang Mohammad Alizadeh, Amir Tafazzoli, Mohsen Rostami Nejad, Mohammad |
author_facet | Fathi, Fariba Ektefa, Fatemeh Arefi Oskouie, Afsaneh Rostami, Kamran Rezaei-Tavirani, Mostafa Houshang Mohammad Alizadeh, Amir Tafazzoli, Mohsen Rostami Nejad, Mohammad |
author_sort | Fathi, Fariba |
collection | PubMed |
description | AIM: The aim of this study is to look for the proper methods that would be a major step towards untreated CD diagnosis and seek the metabolic biomarkers causes of CD and compare them to control group. BACKGROUND: Celiac disease (CD) is a common autoimmune disorder that is not easily diagnosed using the clinical tests. PATIENTS AND METHODS: Thirty cases and 30 controls were entered into this study. Metabolic profiling was obtained using proton nuclear magnetic resonance spectroscopy ((1)HNMR) to seek metabolites that are helpful for the detection of CD. Classification of CD and healthy subject was done using random forest (RF). RESULTS: The obtained classification model showed an 89% correct classification of CD and healthy subject for the external test set. The metabolites that caused changes in people with CD were identified using RF; these metabolites include lactate, valine and lipid. CONCLUSION: The findings of the present study reveal serum lactate, valin and lipid levels in CD patient are lower than healthy cohorts. This metabolite may provide diagnostic tools as well as insight into potential targets for disease therapy. |
format | Online Article Text |
id | pubmed-4017521 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2013 |
publisher | Research Institute for Gastroenterology and Liver Diseases |
record_format | MEDLINE/PubMed |
spelling | pubmed-40175212014-05-15 NMR based metabonomics study on celiac disease in the blood serum Fathi, Fariba Ektefa, Fatemeh Arefi Oskouie, Afsaneh Rostami, Kamran Rezaei-Tavirani, Mostafa Houshang Mohammad Alizadeh, Amir Tafazzoli, Mohsen Rostami Nejad, Mohammad Gastroenterol Hepatol Bed Bench Original Article AIM: The aim of this study is to look for the proper methods that would be a major step towards untreated CD diagnosis and seek the metabolic biomarkers causes of CD and compare them to control group. BACKGROUND: Celiac disease (CD) is a common autoimmune disorder that is not easily diagnosed using the clinical tests. PATIENTS AND METHODS: Thirty cases and 30 controls were entered into this study. Metabolic profiling was obtained using proton nuclear magnetic resonance spectroscopy ((1)HNMR) to seek metabolites that are helpful for the detection of CD. Classification of CD and healthy subject was done using random forest (RF). RESULTS: The obtained classification model showed an 89% correct classification of CD and healthy subject for the external test set. The metabolites that caused changes in people with CD were identified using RF; these metabolites include lactate, valine and lipid. CONCLUSION: The findings of the present study reveal serum lactate, valin and lipid levels in CD patient are lower than healthy cohorts. This metabolite may provide diagnostic tools as well as insight into potential targets for disease therapy. Research Institute for Gastroenterology and Liver Diseases 2013 /pmc/articles/PMC4017521/ /pubmed/24834271 Text en Copyright © 2013 Research Institute for Gastroenterology and Liver Diseases http://creativecommons.org/licenses/by-nc/3.0/ This work is licensed under a Creative Commons Attribution-NonCommercial 3.0 Unported License which allows users to read, copy, distribute and make derivative works for non-commercial purposes from the material, as long as the author of the original work is cited properly. |
spellingShingle | Original Article Fathi, Fariba Ektefa, Fatemeh Arefi Oskouie, Afsaneh Rostami, Kamran Rezaei-Tavirani, Mostafa Houshang Mohammad Alizadeh, Amir Tafazzoli, Mohsen Rostami Nejad, Mohammad NMR based metabonomics study on celiac disease in the blood serum |
title | NMR based metabonomics study on celiac disease in the blood serum |
title_full | NMR based metabonomics study on celiac disease in the blood serum |
title_fullStr | NMR based metabonomics study on celiac disease in the blood serum |
title_full_unstemmed | NMR based metabonomics study on celiac disease in the blood serum |
title_short | NMR based metabonomics study on celiac disease in the blood serum |
title_sort | nmr based metabonomics study on celiac disease in the blood serum |
topic | Original Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4017521/ https://www.ncbi.nlm.nih.gov/pubmed/24834271 |
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