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MyLabStocks: a web-application to manage molecular biology materials

Laboratory stocks are the hardware of research. They must be stored and managed with mimimum loss of material and information. Plasmids, oligonucleotides and strains are regularly exchanged between collaborators within and between laboratories. Managing and sharing information about every item is cr...

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Detalles Bibliográficos
Autores principales: Chuffart, Florent, Yvert, Gaël
Formato: Online Artículo Texto
Lenguaje:English
Publicado: BlackWell Publishing Ltd 2014
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4019915/
https://www.ncbi.nlm.nih.gov/pubmed/24643870
http://dx.doi.org/10.1002/yea.3008
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author Chuffart, Florent
Yvert, Gaël
author_facet Chuffart, Florent
Yvert, Gaël
author_sort Chuffart, Florent
collection PubMed
description Laboratory stocks are the hardware of research. They must be stored and managed with mimimum loss of material and information. Plasmids, oligonucleotides and strains are regularly exchanged between collaborators within and between laboratories. Managing and sharing information about every item is crucial for retrieval of reagents, for planning experiments and for reproducing past experimental results. We have developed a web-based application to manage stocks commonly used in a molecular biology laboratory. Its functionalities include user-defined privileges, visualization of plasmid maps directly from their sequence and the capacity to search items from fields of annotation or directly from a query sequence using BLAST. It is designed to handle records of plasmids, oligonucleotides, yeast strains, antibodies, pipettes and notebooks. Based on PHP/MySQL, it can easily be extended to handle other types of stocks and it can be installed on any server architecture. MyLabStocks is freely available from: https://forge.cbp.ens-lyon.fr/redmine/projects/mylabstocks under an open source licence.
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spelling pubmed-40199152014-05-14 MyLabStocks: a web-application to manage molecular biology materials Chuffart, Florent Yvert, Gaël Yeast Research Article Laboratory stocks are the hardware of research. They must be stored and managed with mimimum loss of material and information. Plasmids, oligonucleotides and strains are regularly exchanged between collaborators within and between laboratories. Managing and sharing information about every item is crucial for retrieval of reagents, for planning experiments and for reproducing past experimental results. We have developed a web-based application to manage stocks commonly used in a molecular biology laboratory. Its functionalities include user-defined privileges, visualization of plasmid maps directly from their sequence and the capacity to search items from fields of annotation or directly from a query sequence using BLAST. It is designed to handle records of plasmids, oligonucleotides, yeast strains, antibodies, pipettes and notebooks. Based on PHP/MySQL, it can easily be extended to handle other types of stocks and it can be installed on any server architecture. MyLabStocks is freely available from: https://forge.cbp.ens-lyon.fr/redmine/projects/mylabstocks under an open source licence. BlackWell Publishing Ltd 2014-05 2014-04-09 /pmc/articles/PMC4019915/ /pubmed/24643870 http://dx.doi.org/10.1002/yea.3008 Text en © 2014 Laboratoire de Biologie Moleculaire de la Cellule CNRS. Yeast published by John Wiley & Sons, Ltd. http://creativecommons.org/licenses/by/3.0/ This is an open access article under the terms of the Creative Commons Attribution License, which permits use, distribution and reproduction in any medium, provided the original work is properly cited.
spellingShingle Research Article
Chuffart, Florent
Yvert, Gaël
MyLabStocks: a web-application to manage molecular biology materials
title MyLabStocks: a web-application to manage molecular biology materials
title_full MyLabStocks: a web-application to manage molecular biology materials
title_fullStr MyLabStocks: a web-application to manage molecular biology materials
title_full_unstemmed MyLabStocks: a web-application to manage molecular biology materials
title_short MyLabStocks: a web-application to manage molecular biology materials
title_sort mylabstocks: a web-application to manage molecular biology materials
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4019915/
https://www.ncbi.nlm.nih.gov/pubmed/24643870
http://dx.doi.org/10.1002/yea.3008
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